RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ARCQ7LC44 396 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 TTC5Q8N0Z6 440 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 DCAF4L2Q8NA75 395 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 OR2T34Q8NGX1 318 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 AKR7LQ8NHP1 331 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 RLN3Q8WXF3 142 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 CELF6Q96J87 481 aaKnown RBP3.83□□□□□ -1.8
PTCD3-205ENST00000464541 TCEANC2Q96MN5 208 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 CYP2S1Q96SQ9 504 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 MTG1Q9BT17 334 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-205ENST00000464541 GSDMCQ9BYG8 508 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 RPRD1BQ9NQG5 326 aaKnown RBP3.83□□□□□ -1.8
PTCD3-205ENST00000464541 ANGPTL2Q9UKU9 493 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 TTC41PQ6P2S7 1318 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.82□□□□□ -1.8
PTCD3-205ENST00000464541 H3BMQ9 156 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 K7EQM0 130 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 SULT2B1O00204 365 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 POLR2DO15514 142 aaKnown RBP3.82□□□□□ -1.8
PTCD3-205ENST00000464541 E2F6O75461 281 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 CA11O75493 328 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 SUPT7LO94864 414 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 SNAPINO95295 136 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 IGF1P05019 195 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 ZNF17P17021 662 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 ATP6V1C1P21283 382 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 MAGEA5P43359 124 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 DAZ2Q13117 558 aaKnown RBP3.82□□□□□ -1.8
PTCD3-205ENST00000464541 USH1GQ495M9 461 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 ACSM5Q6NUN0 579 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 SLC22A9Q8IVM8 553 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 ZDHHC21Q8IVQ6 265 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 ENTHD1Q8IYW4 607 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 PDCL2Q8N4E4 241 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 FADS6Q8N9I5 356 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 DCUN1D4Q92564 292 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 ZNF607Q96SK3 696 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 NRTNQ99748 197 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 ARHGDIGQ99819 225 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 RNF126Q9BV68 326 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 FAM192AQ9GZU8 254 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 XKR8Q9H6D3 395 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 NARFLQ9H6Q4 476 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 WDR76Q9H967 626 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 DAZ3Q9NR90 486 aaKnown RBP3.82□□□□□ -1.8
PTCD3-205ENST00000464541 BTNL2Q9UIR0 455 aa3.82□□□□□ -1.8
PTCD3-205ENST00000464541 A0A075B6Q4 140 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 A0A1B0GUA9 196 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 A0A1B0GUL7 405 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 GOLGA6L7A0A1B0GV03 622 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 GSAPA4D1B5 854 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 USP27XA6NNY8 438 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 A8MUI8 341 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 MED7O43513 233 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 SURF6O75683 361 aaKnown RBP3.81□□□□□ -1.8
PTCD3-205ENST00000464541 B3GAT3O94766 335 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 AGTP01019 485 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 CSF2P04141 144 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 UGT2B4P06133 528 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 POLR2MP0CAP2 368 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 PSG2P11465 335 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 ANXA8P13928 327 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 NCF2P19878 526 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-205ENST00000464541 TBXA2RP21731 343 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 HTR2AP28223 471 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 HTR1EP28566 365 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 TAGLN2P37802 199 aaKnown RBP3.81□□□□□ -1.8
PTCD3-205ENST00000464541 RBMXP38159 391 aaKnown RBP3.81□□□□□ -1.8
PTCD3-205ENST00000464541 EPS15P42566 896 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 MAP2K1Q02750 393 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-205ENST00000464541 SPAG1Q07617 926 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 ANXA8L1Q5VT79 327 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 PRAMEF20Q5VT98 475 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 FAM199XQ6PEV8 388 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-205ENST00000464541 C16orf62Q7Z3J2 963 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 ERASQ7Z444 233 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 NRMQ8IXM6 262 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 LINC01561Q8N1V8 128 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 BHLHE23Q8NDY6 225 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 RASD2Q96D21 266 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 SECISBP2Q96T21 854 aaKnown RBP3.81□□□□□ -1.8
PTCD3-205ENST00000464541 SLC25A39Q9BZJ4 359 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-205ENST00000464541 EXO5Q9H790 373 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 SUN2Q9UH99 717 aa3.81□□□□□ -1.8
PTCD3-205ENST00000464541 GTF3C1Q12789 2109 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 A0A0U1RQS6 177 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 PSMB11A5LHX3 300 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 GOLGA8OA6NCC3 632 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 PCP4L1A6NKN8 68 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 GOLGA8NF8WBI6 632 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 XPO1O14980 1071 aaKnown RBP3.8□□□□□ -1.8
PTCD3-205ENST00000464541 CACNG3O60359 315 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 HCN1O60741 890 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 B4GALT2O60909 372 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 STAMBPO95630 424 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 PAHP00439 452 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 FGF4P08620 206 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 UBTFL6P0CB48 400 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-205ENST00000464541 TPSB2P20231 275 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 CD1BP29016 333 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms