RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 JAM3Q9BX67 310 aa19.89■□□□□ 0.77
PDLIM2-216ENST00000464275 A0A1W2PQD3 144 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 FAM183AA6NL82 134 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 RIIAD1A6NNX1 92 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 LIMS3P0CW19 117 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 LIMS4P0CW20 117 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 HK1P19367 917 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 RPS19P39019 145 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 PNLIPRP2P54317 469 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 DESI1Q6ICB0 168 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 TMPRSS11AQ6ZMR5 421 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 SHFQ7M4L6 423 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 PSD4Q8NDX1 1056 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 OR4F15Q8NGB8 312 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 OTULINQ96BN8 352 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 GFM1Q96RP9 751 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 MED18Q9BUE0 208 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 LAMA1P25391 3075 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 CDC14CA4D256 554 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 ELOA3DA6NLF2 546 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 PRR23D1E9PI22 279 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 AGRPO00253 132 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 NDUFB2O95178 105 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 PPP1R3DO95685 299 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 IGF2P01344 180 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 IGHA1P01876 353 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 SYPP08247 313 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 PRR23D2P0DMB1 279 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 SLC1A3P43003 542 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 SLC6A8P48029 635 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 CCR4P51679 360 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 ELOA3BQ3SY89 546 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 GDPD3Q7L5L3 318 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 OVCH1Q7RTY7 1134 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 ANKRD37Q7Z713 158 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 BPHLQ86WA6 291 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 PPP1R3BQ86XI6 285 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 DTWD2Q8NBA8 298 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 ELOA3Q8NG57 546 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 OMA1Q96E52 524 aa19.88■□□□□ 0.77
PDLIM2-216ENST00000464275 CTDSP2O14595 271 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 PEPDP12955 493 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 PHF19Q5T6S3 580 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 OR2G6Q5TZ20 316 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 ZNF385CQ66K41 422 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 ARHGAP11AQ6P4F7 1023 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 CBLN3Q6UW01 205 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 ATG4DQ86TL0 474 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 SLC25A46Q96AG3 418 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 SDHCQ99643 169 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 KCNS3Q9BQ31 491 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 TMEM43Q9BTV4 400 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 TNFRSF10DQ9UBN6 386 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 PCDHGB2Q9Y5G2 931 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 PCNX3Q9H6A9 2034 aa19.87■□□□□ 0.77
PDLIM2-216ENST00000464275 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 IDSB3KWA1 339 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 ALOX12BO75342 701 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 OR7A10O76100 309 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 ZNF3P17036 446 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 ATP6V1E1P36543 226 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 TMEM105Q8N8V8 129 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 TP53INP1Q96A56 240 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 NACC2Q96BF6 587 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 SEMA4CQ9C0C4 833 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 MED20Q9H944 212 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 ZNF337Q9Y3M9 751 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 ALG1L2C9J202 215 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 IFNGP01579 166 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 TSPAN19P0C672 248 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 PAICSP22234 425 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 ABCD3P28288 659 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 TPBGQ13641 420 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 SLC37A3Q8NCC5 494 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 METTL21AQ8WXB1 218 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 LRFN5Q96NI6 719 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 COQ7Q99807 217 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 ARHGAP9Q9BRR9 750 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 C12orf10Q9HB07 376 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 SACM1LQ9NTJ5 587 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 CMAHPQ9Y471 501 aa19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 SPIN1Q9Y657 262 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-216ENST00000464275 SLC22A31A6NKX4 558 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 VSTM2BA6NLU5 285 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 EIF4E2O60573 245 aaKnown RBP19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 GAAP10253 952 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 ZNF362Q5T0B9 420 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 LIPKQ5VXJ0 399 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 LHFPL3Q86UP9 236 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 KLHL36Q8N4N3 616 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 GATAD2BQ8WXI9 593 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 AP3S1Q92572 193 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 PTP4A1Q93096 173 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 KIAA1143Q96AT1 154 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 NECAB3Q96P71 396 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 BARHL1Q9BZE3 327 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 OCIAD1Q9NX40 245 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 ERVK13-1Q9NX77 482 aa19.85■□□□□ 0.77
PDLIM2-216ENST00000464275 IGKV1D-42A0A075B6H8 117 aa19.84■□□□□ 0.77
PDLIM2-216ENST00000464275 IGHV3-20A0A0C4DH32 117 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms