RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 HIST1H2ADP20671 130 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 NT5EP21589 574 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 DRD5P21918 477 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 ME2P23368 584 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 ATP5A1P25705 553 aaKnown RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 TIA1P31483 386 aaKnown RBP eCLIP2.39□□□□□ -2.039e-9■■■□□ 17.1
CD46-210ENST00000462968 FEN1P39748 380 aaKnown RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 CDKN2BP42772 138 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 ATP5OP48047 213 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 GAS1P54826 345 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 LCN2P80188 198 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 EMX1Q04741 257 aaPredicted RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 CDH17Q12864 832 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 ZNF154Q13106 437 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 CUL1Q13616 776 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 DHX34Q14147 1143 aaKnown RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 EFR3AQ14156 821 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 TBCCQ15814 346 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 GABRA6Q16445 453 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 NNATQ16517 81 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 ZNF239Q16600 458 aaKnown RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 PARP6Q2NL67 630 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 TMEM44Q2T9K0 475 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 DEFB112Q30KQ8 113 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 LRRC38Q5VT99 294 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 FBXW9Q5XUX1 488 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 REP15Q6BDI9 236 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 ZFAND6Q6FIF0 208 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 MFSD7Q6UXD7 560 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 TMIGD1Q6UXZ0 262 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 FCRLAQ7L513 359 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 SPATA21Q7Z572 469 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 LINC00523Q86TU6 105 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 JAZF1Q86VZ6 243 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 CCDC50Q8IVM0 306 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 ZNF100Q8IYN0 542 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 UBE2J2Q8N2K1 259 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 SLC43A2Q8N370 569 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 C17orf78Q8N4C9 275 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 NKAPQ8N5F7 415 aaKnown RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 CEP112Q8N8E3 955 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 ACOT4Q8N9L9 421 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 WDR31Q8NA23 367 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 SRFBP1Q8NEF9 429 aaKnown RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 WFDC9Q8NEX5 89 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 NUP37Q8NFH4 326 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 OR7G1Q8NGA0 311 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 OR4F15Q8NGB8 312 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 OR8K1Q8NGG5 319 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 OR52E2Q8NGJ4 325 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 OR56A3Q8NH54 315 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 CKAP2Q8WWK9 683 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 LPGAT1Q92604 370 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 CPNE4Q96A23 557 aaPredicted RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 C1GALT1C1Q96EU7 318 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 SLC35A4Q96G79 324 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 FAM71F1Q96KD3 344 aaPredicted RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 ANKRD27Q96NW4 1050 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 H2AFJQ9BTM1 129 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 LRRC1Q9BTT6 524 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 KATNB1Q9BVA0 655 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 C11orf54Q9H0W9 315 aaPredicted RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 TPK1Q9H3S4 243 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 ZNF442Q9H7R0 627 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 C10orf88Q9H8K7 445 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 MARCH7Q9H992 704 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 CXorf21Q9HAI6 301 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 PARVBQ9HBI1 364 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 SIRT3Q9NTG7 399 aaPredicted RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 DDX56Q9NY93 547 aaKnown RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 MED11Q9P086 117 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 KLHL9Q9P2J3 617 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 PURGQ9UJV8 347 aaKnown RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 AMDHD2Q9Y303 409 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 KCNE2Q9Y6J6 123 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 SNRNP200O75643 2136 aaKnown RBP2.39□□□□□ -2.03
CD46-210ENST00000462968 CSMD3Q7Z407 3707 aa2.39□□□□□ -2.03
CD46-210ENST00000462968 NCKAP5O14513 1909 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 A0A0J9YW62 118 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 ZNF816-ZNF321PA0A0X1KG74 233 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 TMEM129A0AVI4 362 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 C1orf226A1L170 272 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 AGAP5A6NIR3 686 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 C17orf51A8MQB3 221 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 ZNF724A8MTY0 619 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 POC1B-GALNT4F8VUJ3 575 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 SYNGR3O43761 229 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 ANGPTL7O43827 346 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 GPR137BO60478 399 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 EEDO75530 441 aaKnown RBP2.38□□□□□ -2.03
CD46-210ENST00000462968 FOXH1O75593 365 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 RP2O75695 350 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 ZNF189O75820 626 aaPredicted RBP2.38□□□□□ -2.03
CD46-210ENST00000462968 TSPAN9O75954 239 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 NXPH3O95157 252 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 SCELO95171 688 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 DUS4LO95620 317 aaKnown RBP2.38□□□□□ -2.03
CD46-210ENST00000462968 TBX6O95947 436 aaPredicted RBP2.38□□□□□ -2.03
CD46-210ENST00000462968 OPN1LWP04000 364 aa2.38□□□□□ -2.03
CD46-210ENST00000462968 C1GALT1C1LP0DN25 315 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms