RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 EMC9Q9Y3B6 208 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 CHST2Q9Y4C5 530 aa7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 GPC6Q9Y625 555 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-210ENST00000462553 A0A1W2PP18 115 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 AGAP5A6NIR3 686 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 GTPBP1O00178 669 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 CLIC1O00299 241 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 AP3D1O14617 1153 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 TNFSF11O14788 317 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 ADAMDEC1O15204 470 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 CXCL13O43927 109 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 ANP32DO95626 131 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 CSTAP01040 98 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 OPN1LWP04000 364 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 BCHEP06276 602 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 ARAFP10398 606 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 NR2F1P10589 423 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 NCF2P19878 526 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 ADH6P28332 368 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 MDH1P40925 334 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 CRATP43155 626 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 ANXA11P50995 505 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 CCR4P51679 360 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 SESN3P58005 492 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 RPS4XP62701 263 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 HPCAP84074 193 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 SF3A3Q12874 501 aaKnown RBP eCLIP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 FADDQ13158 208 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 CBFBQ13951 182 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 VEZF1Q14119 521 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 SELPLGQ14242 412 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 QPRTQ15274 297 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 RGNQ15493 299 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 CLEC12BQ2HXU8 276 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 MRPL2Q5T653 305 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 ADAM5Q6NVV9 412 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 EIF3MQ7L2H7 374 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 VRK2Q86Y07 508 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 PHC2Q8IXK0 858 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 GABRG1Q8N1C3 465 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 DPP10Q8N608 796 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 TMCO5AQ8N6Q1 288 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 OR2V1Q8NHB1 315 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 SLC38A5Q8WUX1 472 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 WDR60Q8WVS4 1066 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 NANOS1Q8WY41 292 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 ST8SIA1Q92185 356 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 NEUROG1Q92886 237 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 MAL2Q969L2 176 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 S100PBPQ96BU1 408 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 MRGPRX4Q96LA9 322 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 KLHL15Q96M94 604 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 SRXN1Q9BYN0 137 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 A4GALTQ9NPC4 353 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 EXOSC3Q9NQT5 275 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 ACER3Q9NUN7 267 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 LEF1Q9UJU2 399 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 LAMP3Q9UQV4 416 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 SLC35A3Q9Y2D2 325 aa7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 MAGED1Q9Y5V3 778 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-210ENST00000462553 A0A096LNT2 108 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 FXYD1O00168 92 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 FBP2O00757 339 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 CYP7B1O75881 506 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 NUDT14O95848 222 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 PLGP00747 810 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 IGHV4-39P01824 125 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 DBIP07108 87 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 VIMP08670 466 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 TROVE2P10155 538 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 PGCP20142 388 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 SFTPDP35247 375 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 CDKN1AP38936 164 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 EIF1P41567 113 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 ARFIP2P53365 341 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 CRISP3P54108 245 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 CTBP2P56545 445 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 KCNJ10P78508 379 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 SELENBP1Q13228 472 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 TSC22D1Q15714 1073 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 ADRM1Q16186 407 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 SGCBQ16585 318 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZNF239Q16600 458 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 HSP90B2PQ58FF3 399 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 RUNDC3AQ59EK9 446 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 NCMAPQ5T1S8 102 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 RNF220Q5VTB9 566 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 PRAMEF8Q5VWM4 474 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 PRAMEF7Q5VXH5 474 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 METTL21CQ5VZV1 264 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 PPP4R4Q6NUP7 873 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 TFAP2EQ6VUC0 442 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZNF836Q6ZNA1 936 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 BEND4Q6ZU67 534 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 DHDDSQ86SQ9 333 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 COMTD1Q86VU5 262 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 PTOV1Q86YD1 416 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 CMIPQ8IY22 773 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 KBTBD8Q8NFY9 601 aa7.02□□□□□ -1.29
CDC42BPA-210ENST00000462553 RNF128Q8TEB7 428 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms