RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 H3F3AP84243 136 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 KRTAP21-3Q3LHN1 58 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 GTDC1Q4AE62 458 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 CCDC103Q8IW40 242 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 ZNF440Q8IYI8 595 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 OR52P1PQ8NH57 321 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 LILRB1Q8NHL6 650 aaPredicted RBP16.75■□□□□ 0.27
VARS-220ENST00000461874 SLC38A5Q8WUX1 472 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 TMEM171Q8WVE6 324 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 VPS33AQ96AX1 596 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 DDIT4LQ96D03 193 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 Q96MF0 132 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 ADAM19Q9H013 955 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 RLIMQ9NVW2 624 aa16.75■□□□□ 0.27
VARS-220ENST00000461874 NOSIPQ9Y314 301 aaKnown RBP16.75■□□□□ 0.27
VARS-220ENST00000461874 FAM234BA2RU67 622 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 CDHR4A6H8M9 788 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 GPR171O14626 319 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 RAMP1O60894 148 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 UQCRBP14927 111 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 NTF4P34130 210 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 CRISP3P54108 245 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 DSTNP60981 165 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 FBXW9Q5XUX1 488 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 ATG4DQ86TL0 474 aaPredicted RBP16.74■□□□□ 0.27
VARS-220ENST00000461874 VRK2Q86Y07 508 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 APH1AQ96BI3 265 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 AURKBQ96GD4 344 aaPredicted RBP16.74■□□□□ 0.27
VARS-220ENST00000461874 C7orf26Q96N11 449 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 CXorf56Q9H5V9 222 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 ZNF701Q9NV72 531 aaPredicted RBP16.74■□□□□ 0.27
VARS-220ENST00000461874 THUMPD1Q9NXG2 353 aaKnown RBP16.74■□□□□ 0.27
VARS-220ENST00000461874 PRDM4Q9UKN5 801 aa16.74■□□□□ 0.27
VARS-220ENST00000461874 DPRXA6NFQ7 191 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 CLOCKO15516 846 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 EIF1BO60739 113 aaKnown RBP16.73■□□□□ 0.27
VARS-220ENST00000461874 PGM3O95394 542 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 IGHV3-9P01782 118 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 BCHEP06276 602 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 GKN3PP0CG01 181 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 IMPDH2P12268 514 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 GGT1P19440 569 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 MRPL19P49406 292 aaKnown RBP16.73■□□□□ 0.27
VARS-220ENST00000461874 SLC35A1P78382 337 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 PPA1Q15181 289 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 STK11Q15831 433 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 LIN52Q52LA3 116 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 TIMM23BQ5SRD1 257 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 C6orf10Q5SRN2 563 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 ZNF836Q6ZNA1 936 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 SSX8Q7RTT4 187 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 P2RY8Q86VZ1 359 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 LSRQ86X29 649 aaPredicted RBP16.73■□□□□ 0.27
VARS-220ENST00000461874 CIARTQ8N365 385 aaPredicted RBP16.73■□□□□ 0.27
VARS-220ENST00000461874 ZNF433Q8N7K0 673 aaPredicted RBP16.73■□□□□ 0.27
VARS-220ENST00000461874 GTF2H4Q92759 462 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 MUCL1Q96DR8 90 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 COX4I2Q96KJ9 171 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 BDH2Q9BUT1 245 aa16.73■□□□□ 0.27
VARS-220ENST00000461874 CSPG4Q6UVK1 2322 aa16.72■□□□□ 0.27
VARS-220ENST00000461874 ZC3H12DA2A288 527 aaKnown RBP16.72■□□□□ 0.27
VARS-220ENST00000461874 H7C1Q1 480 aa16.72■□□□□ 0.27
VARS-220ENST00000461874 TGDSO95455 350 aa16.72■□□□□ 0.27
VARS-220ENST00000461874 ACAA2P42765 397 aaKnown RBP16.72■□□□□ 0.27
VARS-220ENST00000461874 BSPH1Q075Z2 132 aa16.72■□□□□ 0.27
VARS-220ENST00000461874 RNF220Q5VTB9 566 aa16.72■□□□□ 0.27
VARS-220ENST00000461874 UBE2J2Q8N2K1 259 aa16.72■□□□□ 0.27
VARS-220ENST00000461874 NEUROG1Q92886 237 aa16.72■□□□□ 0.27
VARS-220ENST00000461874 TMEM19Q96HH6 336 aa16.72■□□□□ 0.27
VARS-220ENST00000461874 NAA11Q9BSU3 229 aaPredicted RBP16.72■□□□□ 0.27
VARS-220ENST00000461874 PAIP1Q9H074 479 aaKnown RBP16.72■□□□□ 0.27
VARS-220ENST00000461874 SLCO1B3Q9NPD5 702 aa16.72■□□□□ 0.27
VARS-220ENST00000461874 LAMP3Q9UQV4 416 aa16.72■□□□□ 0.27
VARS-220ENST00000461874 ZNF443Q9Y2A4 671 aaPredicted RBP16.72■□□□□ 0.27
VARS-220ENST00000461874 PCDHB14Q9Y5E9 798 aa16.72■□□□□ 0.27
VARS-220ENST00000461874 A0A0G2JPF8 293 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 OR5H1A6NKK0 313 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 HNRNPCL2B2RXH8 293 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 HNRNPCL3B7ZW38 293 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 HNRNPCL1O60812 293 aaKnown RBP16.71■□□□□ 0.27
VARS-220ENST00000461874 MRPL33O75394 65 aaKnown RBP16.71■□□□□ 0.27
VARS-220ENST00000461874 THBS1P07996 1170 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 HNRNPCL4P0DMR1 293 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 LARS2Q15031 903 aaKnown RBP16.71■□□□□ 0.27
VARS-220ENST00000461874 RGNQ15493 299 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 ZSWIM7Q19AV6 140 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 ZNF672Q499Z4 452 aaPredicted RBP16.71■□□□□ 0.27
VARS-220ENST00000461874 RPS26P11Q5JNZ5 115 aaPredicted RBP16.71■□□□□ 0.27
VARS-220ENST00000461874 SLC2A7Q6PXP3 512 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 CLEC9AQ6UXN8 241 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 CLIP4Q8N3C7 705 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 LRRC8CQ8TDW0 803 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 FBXW5Q969U6 566 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 TCF7L2Q9NQB0 619 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 MALT1Q9UDY8 824 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 ZNF232Q9UNY5 417 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 CHST2Q9Y4C5 530 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 FLVCR1Q9Y5Y0 555 aa16.71■□□□□ 0.27
VARS-220ENST00000461874 TLN2Q9Y4G6 2542 aa16.7■□□□□ 0.26
VARS-220ENST00000461874 NSD1Q96L73 2696 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms