RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 NCALDP61601 193 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 PDK3Q15120 406 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 TSC22D1Q15714 1073 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 TIMM23BQ5SRD1 257 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 MRPL2Q5T653 305 aaKnown RBP7.87□□□□□ -1.15
LDB1-203ENST00000461873 FBXW9Q5XUX1 488 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 TMEM108Q6UXF1 575 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 CASP12Q6UXS9 341 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 OLIG3Q7RTU3 272 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 GPAT4Q86UL3 456 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 KRT73Q86Y46 540 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 GABRG1Q8N1C3 465 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 ANKFN1Q8N957 763 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 RNF217Q8TC41 542 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 ZNF75CPQ92670 426 aaPredicted RBP7.87□□□□□ -1.15
LDB1-203ENST00000461873 DNAJA3Q96EY1 480 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 THOC1Q96FV9 657 aaKnown RBP7.87□□□□□ -1.15
LDB1-203ENST00000461873 MARK4Q96L34 752 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 HS6ST2Q96MM7 605 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 HS3ST6Q96QI5 342 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 ZNF300Q96RE9 604 aaPredicted RBP7.87□□□□□ -1.15
LDB1-203ENST00000461873 KCNS3Q9BQ31 491 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 INPP5KQ9BT40 448 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 SPATA5L1Q9BVQ7 753 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 FAM107BQ9H098 131 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 TPT1P8Q9HAU6 139 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 CORO2BQ9UQ03 480 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 MGAT4BQ9UQ53 548 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 TRAPPC4Q9Y296 219 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 SLC9A8Q9Y2E8 581 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 GPR45Q9Y5Y3 372 aa7.87□□□□□ -1.15
LDB1-203ENST00000461873 TEP1Q99973 2627 aaKnown RBP7.87□□□□□ -1.15
LDB1-203ENST00000461873 A0A096LPI6 279 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 A0A0G2JPF8 293 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 EVPLLA8MZ36 301 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 HNRNPCL2B2RXH8 293 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 HNRNPCL3B7ZW38 293 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 H7C1Q1 480 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 ETV2O00321 342 aaPredicted RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 KLF11O14901 512 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 KLF4O43474 513 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 HNRNPCL1O60812 293 aaKnown RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 GCM2O75603 506 aaPredicted RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 RAD51DO75771 328 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 WNT11O96014 354 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 IGHV3-9P01782 118 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 THBDP07204 575 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 HNRNPCL4P0DMR1 293 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 PPIBP23284 216 aaKnown RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 LSP1P33241 339 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 CDKN2CP42773 168 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 PHC1P78364 1004 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 IL1RL1Q01638 556 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 FAPQ12884 760 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 VEZF1Q14119 521 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 TAB1Q15750 504 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 ETFDHQ16134 617 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 MAPK14Q16539 360 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 ZNF311Q5JNZ3 666 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 NCMAPQ5T1S8 102 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 OTUD3Q5T2D3 398 aaPredicted RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 AGAP6Q5VW22 663 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 WBP2NLQ6ICG8 309 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 SLC22A25Q6T423 547 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 SMAP2Q8WU79 429 aaPredicted RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 CNOT9Q92600 299 aaKnown RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 TEX37Q96LM6 180 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 ADAD1Q96M93 576 aaKnown RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 KLHDC3Q9BQ90 382 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 CCDC106Q9BWC9 280 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 GSX2Q9BZM3 304 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 GSX1Q9H4S2 264 aaPredicted RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 SLCO1B3Q9NPD5 702 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 TCF7L2Q9NQB0 619 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 TAS2R16Q9NYV7 291 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 CISD1Q9NZ45 108 aaKnown RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 PRSS50Q9UI38 385 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 KCNE5Q9UJ90 142 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 MAGED1Q9Y5V3 778 aaPredicted RBP7.86□□□□□ -1.15
LDB1-203ENST00000461873 USH1CQ9Y6N9 552 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 ITPR3Q14573 2671 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 ARID1AO14497 2285 aa7.86□□□□□ -1.15
LDB1-203ENST00000461873 HIVEP1P15822 2718 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 CENPVL1A0A0U1RR11 272 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 A0A1W2PPR1 153 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 ELOA3DA6NLF2 546 aaPredicted RBP7.85□□□□□ -1.15
LDB1-203ENST00000461873 CLDN24A6NM45 220 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 A8MVM7 634 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 VSTM5A8MXK1 200 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 CLIC1O00299 241 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 NR5A2O00482 541 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 SIAH2O43255 324 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 DNAJA2O60884 412 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 VAMP5O95183 116 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 AHSA1O95433 338 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 TGDSO95455 350 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 THBS1P07996 1170 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 CHRM4P08173 479 aa7.85□□□□□ -1.15
LDB1-203ENST00000461873 ZCCHC18P0CG32 403 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms