RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 CENPLQ8N0S6 344 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF433Q8N7K0 673 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 SEMA6DQ8NFY4 1073 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 RFWD2Q8NHY2 731 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 FBXO30Q8TB52 745 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 ACTRT2Q8TDY3 377 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 CFHR4Q92496 578 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 PIK3R3Q92569 461 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 JADE3Q92613 823 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 APH1AQ96BI3 265 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 ARL8AQ96BM9 186 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 CHMP6Q96FZ7 201 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 OR5B2Q96R09 309 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF300Q96RE9 604 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 NPAS1Q99742 590 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 PSD2Q9BQI7 771 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 LMF2Q9BU23 707 aaKnown RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 RBM4Q9BWF3 364 aaKnown RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 EBPLQ9BY08 206 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 CXorf36Q9H7Y0 433 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 BCO1Q9HAY6 547 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 ASB6Q9NWX5 421 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 RNF14Q9UBS8 474 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 PCTPQ9UKL6 214 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 TMCO1Q9UM00 188 aa4.4□□□□□ -1.71
BRCA1-206ENST00000461574 C19orf53Q9UNZ5 99 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 NOSIPQ9Y314 301 aaKnown RBP4.4□□□□□ -1.71
BRCA1-206ENST00000461574 GOLGA8QA0A0J9YX86 632 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 TMEM89A2RUT3 159 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 GOLGA8OA6NCC3 632 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 TTC36A6NLP5 189 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 ATP6V1G2-DDX39BF2Z307 99 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 GOLGA8NF8WBI6 632 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 H3BNH8 94 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 STX16-NPEPL1H3BU86 382 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 GOLGA8RI6L899 631 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 GTPBP1O00178 669 aaKnown RBP4.39□□□□□ -1.71
BRCA1-206ENST00000461574 UPK1AO00322 258 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF195O14628 629 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 STX16O14662 325 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 PRODHO43272 600 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 CYTIPO60759 359 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 OR4F21O95013 312 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 KLHL2O95198 593 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 PGM3O95394 542 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 IGKV1D-16P01601 117 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 C2P06681 752 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 ADH4P08319 380 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 ANXA4P09525 319 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-206ENST00000461574 HSD3B1P14060 373 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 DAOP14920 347 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 DDX5P17844 614 aaKnown RBP4.39□□□□□ -1.71
BRCA1-206ENST00000461574 TSPAN8P19075 237 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 ATP6V1C1P21283 382 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 PSMA4P25789 261 aaKnown RBP4.39□□□□□ -1.71
BRCA1-206ENST00000461574 HSD3B2P26439 372 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 TYK2P29597 1187 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 TIA1P31483 386 aaKnown RBP eCLIP4.39□□□□□ -1.71
BRCA1-206ENST00000461574 MSX2P35548 267 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-206ENST00000461574 SLC1A3P43003 542 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 GSTM5P46439 218 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 PRIM2P49643 509 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 COMPP49747 757 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-206ENST00000461574 SERPINB8P50452 374 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 PRKAG1P54619 331 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 DVL1P1P54792 670 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-206ENST00000461574 CDH15P55291 814 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 BTKQ06187 659 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF763Q0D2J5 394 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 C2orf80Q0P641 193 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 HSPB3Q12988 150 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 SELENBP1Q13228 472 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 NFYCQ13952 458 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 TECRLQ5HYJ1 363 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 C9orf135Q5VTT2 229 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 FBXW9Q5XUX1 488 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 C3orf33Q6P1S2 294 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 APOOLQ6UXV4 268 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 PEG10Q86TG7 708 aaKnown RBP4.39□□□□□ -1.71
BRCA1-206ENST00000461574 OR2L13Q8N349 312 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 TEX29Q8N6K0 151 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF614Q8N883 585 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 COX18Q8N8Q8 333 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF527Q8NB42 609 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 OR4C3Q8NH37 302 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 CEP70Q8NHQ1 597 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 POC1BQ8TC44 478 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 C16orf78Q8WTQ4 265 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 FAM216AQ8WUB2 273 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 ZHX1-C8orf76Q96EF9 292 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 SOX7Q9BT81 388 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 IQCGQ9H095 443 aaKnown RBP4.39□□□□□ -1.71
BRCA1-206ENST00000461574 RAB1BQ9H0U4 201 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 COQ10BQ9H8M1 238 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 ANKZF1Q9H8Y5 726 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 UBQLN4Q9NRR5 601 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 TAS2R16Q9NYV7 291 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 UPB1Q9UBR1 384 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 GRID1Q9ULK0 1009 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 MOKQ9UQ07 419 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms