RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZNF850A8MQ14 1090 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 ARPC5O15511 151 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 AKAIN1P0CW23 69 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 TEKQ02763 1124 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 OR5B2Q96R09 309 aa13.72□□□□□ -0.21
PTPRU-205ENST00000460170 M0R036 132 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 OR8G3PP0DMU2 310 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 RPS19P39019 145 aaKnown RBP13.71□□□□□ -0.21
PTPRU-205ENST00000460170 TBC1D25Q3MII6 688 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 FCRLAQ7L513 359 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 ABHD4Q8TB40 342 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 OR1E3Q8WZA6 343 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 OR52A5Q9H2C5 316 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 A0A087WUU8 490 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 ASPDHA6ND91 283 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 ZNF736B4DX44 427 aaPredicted RBP13.71□□□□□ -0.21
PTPRU-205ENST00000460170 ARSBP15848 533 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 GPR50Q13585 617 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 FAM205BPQ63HN1 556 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 KIF18BQ86Y91 864 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 FAM26EQ8N5C1 309 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 OR5H2Q8NGV7 314 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 FAM71F1Q96KD3 344 aaPredicted RBP13.71□□□□□ -0.21
PTPRU-205ENST00000460170 AIFM2Q9BRQ8 373 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 ALG12Q9BV10 488 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 SLC6A17Q9H1V8 727 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 SEMA4GQ9NTN9 838 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 ARID1BQ8NFD5 2236 aaPredicted RBP13.71□□□□□ -0.21
PTPRU-205ENST00000460170 CDHR4A6H8M9 788 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 ZAR1LA6NP61 321 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 LAMTOR5O43504 91 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 MPIG6BO95866 241 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 SNRPBP14678 240 aaKnown RBP13.71□□□□□ -0.21
PTPRU-205ENST00000460170 CD1EP15812 388 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 PYCR3Q53H96 274 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 NECAB3Q96P71 396 aaPredicted RBP13.71□□□□□ -0.21
PTPRU-205ENST00000460170 RBM24Q9BX46 236 aaKnown RBP13.71□□□□□ -0.21
PTPRU-205ENST00000460170 CDCA4Q9BXL8 241 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 OR10A5Q9H207 317 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 ELOVL3Q9HB03 270 aa13.71□□□□□ -0.21
PTPRU-205ENST00000460170 TMEM225BP0DP42 221 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 IDUAP35475 653 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 CCR2P41597 374 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 FAHD1Q6P587 224 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 ZC3H10Q96K80 434 aaKnown RBP13.71□□□□□ -0.22
PTPRU-205ENST00000460170 OR2M2Q96R28 347 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 RANGRFQ9HD47 186 aaPredicted RBP13.71□□□□□ -0.22
PTPRU-205ENST00000460170 RCE1Q9Y256 329 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 ACOD1A6NK06 481 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 F5H5P2 479 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 BRINP1O60477 761 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 MYOGP15173 224 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 SQSTM1Q13501 440 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 ATAD3CQ5T2N8 411 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 SFXN4Q6P4A7 337 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 NKAIN4Q8IVV8 208 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 SNIP1Q8TAD8 396 aaKnown RBP13.71□□□□□ -0.22
PTPRU-205ENST00000460170 HIF3AQ9Y2N7 669 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 NOX1Q9Y5S8 564 aa13.71□□□□□ -0.22
PTPRU-205ENST00000460170 SHANK3Q9BYB0 1731 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 TMEM129A0AVI4 362 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 TMEM72A0PK05 275 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 APOC3P02656 99 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 HTR2AP28223 471 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 AQP2P41181 271 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 LIM2P55344 173 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF836Q6ZNA1 936 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 CELF2-AS1Q8N7Q2 184 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 CHST8Q9H2A9 424 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 NOX3Q9HBY0 568 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 DUSP5Q16690 384 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 MANEAQ5SRI9 462 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 OR7E24Q6IFN5 339 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 TCTN3Q6NUS6 607 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 FAM174AQ8TBP5 190 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 ASB17Q8WXJ9 295 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 NMNAT3Q96T66 252 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 MOKQ9UQ07 419 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 CXorf51AA0A1B0GTR3 108 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 GNRHRP30968 328 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 KIAA1024LP59773 190 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 GNMTQ14749 295 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 GARNL3Q5VVW2 1013 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 SSX6Q7RTT6 188 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 PXKQ7Z7A4 578 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 BEST4Q8NFU0 473 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 PHB2Q99623 299 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 GON7Q9BXV9 100 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 SEMA6CQ9H3T2 930 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 DUSP22Q9NRW4 184 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 PCDH10Q9P2E7 1040 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 TBC1D29Q9UFV1 150 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 DAPP1Q9UN19 280 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 TNFRSF10CO14798 259 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 CTSLP07711 333 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 TACR3P29371 465 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 HOXC8P31273 242 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 VASPP50552 380 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-205ENST00000460170 CALHM3Q86XJ0 350 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 SNAPC3Q92966 411 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms