RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 MRPL2Q5T653 305 aaKnown RBP20.1■□□□□ 0.81
PTPN4-207ENST00000460162 GTPBP3Q969Y2 492 aaKnown RBP20.1■□□□□ 0.81
PTPN4-207ENST00000460162 MTHFD2LQ9H903 347 aaPredicted RBP20.1■□□□□ 0.81
PTPN4-207ENST00000460162 OSGIN1Q9UJX0 560 aa20.1■□□□□ 0.81
PTPN4-207ENST00000460162 TMED7Q9Y3B3 224 aa20.1■□□□□ 0.81
PTPN4-207ENST00000460162 RFXANKO14593 260 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 EIF1BO60739 113 aaKnown RBP20.09■□□□□ 0.81
PTPN4-207ENST00000460162 RAD51DO75771 328 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 IL6P05231 212 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 GSNP06396 782 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 NR2F1P10589 423 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 IL7RP16871 459 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 SLC1A3P43003 542 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 H3F3AP84243 136 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 COX20Q5RI15 118 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 ATG16L1Q676U5 607 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 UBE2J2Q8N2K1 259 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 PNPT1Q8TCS8 783 aaKnown RBP20.09■□□□□ 0.81
PTPN4-207ENST00000460162 ZBTB9Q96C00 473 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 MAELQ96JY0 434 aaKnown RBP20.09■□□□□ 0.81
PTPN4-207ENST00000460162 FAIMQ9NVQ4 179 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 ASB6Q9NWX5 421 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 TAS2R16Q9NYV7 291 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 NPAP1Q9NZP6 1156 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 P2RX2Q9UBL9 471 aa20.09■□□□□ 0.81
PTPN4-207ENST00000460162 DSPPQ9NZW4 1301 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 CFAP73A6NFT4 308 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 MRPL33O75394 65 aaKnown RBP20.08■□□□□ 0.81
PTPN4-207ENST00000460162 IGHV3-9P01782 118 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 TACR3P29371 465 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 OR2B6P58173 313 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 SLC35A1P78382 337 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 EPS8Q12929 822 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 VEZF1Q14119 521 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 PGGHGQ32M88 737 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 PEX5LQ8IYB4 626 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 ZNF440Q8IYI8 595 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 MGARPQ8TDB4 240 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 DNAJA3Q96EY1 480 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 RADILQ96JH8 1075 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 GRIP2Q9C0E4 1043 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 ALG2Q9H553 416 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 PRDM4Q9UKN5 801 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 SLC9A8Q9Y2E8 581 aa20.08■□□□□ 0.81
PTPN4-207ENST00000460162 TMEM72A0PK05 275 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 SHISA9B4DS77 424 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 ABCD4O14678 606 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 RAMP1O60894 148 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 KITP10721 976 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 CCNA2P20248 432 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 CDKN1AP38936 164 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 CDH11P55287 796 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 CLEC12BQ2HXU8 276 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 CASP12Q6UXS9 341 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 MSANTD1Q6ZTZ1 278 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 DTX2Q86UW9 622 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 CCDC103Q8IW40 242 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 TRAF4Q9BUZ4 470 aaPredicted RBP20.07■□□□□ 0.8
PTPN4-207ENST00000460162 CISD1Q9NZ45 108 aaKnown RBP20.07■□□□□ 0.8
PTPN4-207ENST00000460162 CALML5Q9NZT1 146 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 JMJD1CQ15652 2540 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 PLCE1Q9P212 2302 aa20.07■□□□□ 0.8
PTPN4-207ENST00000460162 CIB4A0PJX0 185 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 CDHR4A6H8M9 788 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 SLC22A3O75751 556 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 THBS1P07996 1170 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 ZCCHC18P0CG32 403 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 IMPDH2P12268 514 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 PCSK6P29122 969 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 IDUAP35475 653 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 MVDP53602 400 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 PPP2R2BQ00005 443 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 TNK1Q13470 666 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 GSTA3Q16772 222 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 LIN52Q52LA3 116 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 NXNQ6DKJ4 435 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 PAQR6Q6TCH4 344 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 TMEM108Q6UXF1 575 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 NAA11Q9BSU3 229 aaPredicted RBP20.06■□□□□ 0.8
PTPN4-207ENST00000460162 SDR39U1Q9NRG7 319 aaPredicted RBP20.06■□□□□ 0.8
PTPN4-207ENST00000460162 NKIRAS1Q9NYS0 192 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 ZIM2Q9NZV7 527 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 MGAT4BQ9UQ53 548 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 FLVCR1Q9Y5Y0 555 aa20.06■□□□□ 0.8
PTPN4-207ENST00000460162 CCT8L1PA6NM43 557 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 PTAFRP25105 342 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 NTF4P34130 210 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 CRISP3P54108 245 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 FAPQ12884 760 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 MAPK11Q15759 364 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 OR7E24Q6IFN5 339 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 KLHL17Q6TDP4 642 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 ZNF836Q6ZNA1 936 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 RMND5AQ9H871 391 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 MANSC1Q9H8J5 431 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 SLC6A13Q9NSD5 602 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 PARPBPQ9NWS1 579 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 SLC25A15Q9Y619 301 aa20.05■□□□□ 0.8
PTPN4-207ENST00000460162 PDLIM1O00151 329 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 ANP32DO95626 131 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms