RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 B4DXG7 233 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 TO15178 435 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 SCO2O43819 266 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 WISP1O95388 367 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 GPIP06744 558 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 RAP2AP10114 183 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 RPS4Y1P22090 263 aaKnown RBP9.43□□□□□ -0.9
USP39-210ENST00000459775 ITGA3P26006 1051 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 ITPKBP27987 946 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 RYKP34925 604 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 SLC15A1P46059 708 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 LSAMPQ13449 338 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 GANABQ14697 944 aaKnown RBP9.43□□□□□ -0.9
USP39-210ENST00000459775 TSC22D1Q15714 1073 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 C2orf76Q3KRA6 126 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 MTX3Q5HYI7 312 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 CBLN3Q6UW01 205 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 DEF8Q6ZN54 512 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 TMEM179BQ7Z7N9 219 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 RPS19BP1Q86WX3 136 aaKnown RBP9.43□□□□□ -0.9
USP39-210ENST00000459775 RAB43Q86YS6 212 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 SLC34A3Q8N130 599 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 EID3Q8N140 333 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 OR52J3Q8NH60 311 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 SH3YL1Q96HL8 342 aaPredicted RBP9.43□□□□□ -0.9
USP39-210ENST00000459775 UGT2B28Q9BY64 529 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 DCLRE1BQ9H816 532 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 SNTG1Q9NSN8 517 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 CALML5Q9NZT1 146 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 LOC100506127A0A0U1RQW1 187 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 TMEM210A6NLX4 147 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 FFAR1O14842 300 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 PDE9AO76083 593 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 LSM11P83369 360 aaKnown RBP eCLIP9.43□□□□□ -0.9
USP39-210ENST00000459775 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.43□□□□□ -0.9
USP39-210ENST00000459775 IFI44LQ53G44 452 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 KLHL26Q53HC5 615 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 LINC00696Q6ZRV3 163 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 MDGA2Q7Z553 956 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 SLC30A8Q8IWU4 369 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 PQLC1Q8N2U9 271 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 METTL25Q8N6Q8 603 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 TMEM102Q8N9M5 508 aaPredicted RBP9.43□□□□□ -0.9
USP39-210ENST00000459775 PAPD5Q8NDF8 572 aaKnown RBP9.43□□□□□ -0.9
USP39-210ENST00000459775 ICA1LQ8NDH6 482 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 ZNF248Q8NDW4 579 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 OR5L2Q8NGL0 311 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 GRHL3Q8TE85 626 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 KCNE4Q8WWG9 221 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 DUS3LQ96G46 650 aaKnown RBP9.43□□□□□ -0.9
USP39-210ENST00000459775 ZNF354BQ96LW1 612 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 G6PC3Q9BUM1 346 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 GRIP2Q9C0E4 1043 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 IL1RAPQ9NPH3 570 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 PLA2G3Q9NZ20 509 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 RIMS3Q9UJD0 308 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 TESMINQ9Y4I5 508 aa9.43□□□□□ -0.9
USP39-210ENST00000459775 ATMQ13315 3056 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 FUOMA2VDF0 154 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 SAC3D1A6NKF1 404 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 ADAM10O14672 748 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 LGI1O95970 557 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 AK1P00568 194 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 SERPINA7P05543 415 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 DBIP07108 87 aaKnown RBP9.42□□□□□ -0.9
USP39-210ENST00000459775 NID1P14543 1247 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 PEX2P28328 305 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 SLC9A3P48764 834 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 GMFBP60983 142 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 TXNL4AP83876 142 aaKnown RBP9.42□□□□□ -0.9
USP39-210ENST00000459775 TLE3Q04726 772 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 DEFB109BQ30KR1 87 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 PRAMEF20Q5VT98 475 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 PRAMEF8Q5VWM4 474 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 PRAMEF7Q5VXH5 474 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 KBTBD2Q8IY47 623 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 PROX1Q92786 737 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 TP53INP1Q96A56 240 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 HSPBAP1Q96EW2 488 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 LIN7BQ9HAP6 207 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 SLC35D1Q9NTN3 355 aa9.42□□□□□ -0.9
USP39-210ENST00000459775 DSPP15924 2871 aaKnown RBP9.42□□□□□ -0.9
USP39-210ENST00000459775 CDHR4A6H8M9 788 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 PCP4L1A6NKN8 68 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 ACOX3O15254 700 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 CST1P01037 141 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 FABP3P05413 133 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 UMPSP11172 480 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 PRKACGP22612 351 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 RRM2P31350 389 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 PRRX1P54821 245 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 NRG3P56975 720 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 MLF1P58340 268 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 CXADRP78310 365 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 LARS2Q15031 903 aaKnown RBP9.41□□□□□ -0.9
USP39-210ENST00000459775 ZNF141Q15928 474 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 KCTD21Q4G0X4 260 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 CCDC58Q4VC31 144 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 ACER2Q5QJU3 275 aa9.41□□□□□ -0.9
USP39-210ENST00000459775 TBPL2Q6SJ96 375 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms