RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 S100PBPQ96BU1 408 aa14.4□□□□□ -0.1
CPSF6-203ENST00000456847 NAA11Q9BSU3 229 aaPredicted RBP14.4□□□□□ -0.1
CPSF6-203ENST00000456847 HDHD5Q9BXW7 423 aa14.4□□□□□ -0.1
CPSF6-203ENST00000456847 BCL2L10Q9HD36 194 aa14.4□□□□□ -0.1
CPSF6-203ENST00000456847 SLC52A3Q9NQ40 469 aa14.4□□□□□ -0.1
CPSF6-203ENST00000456847 PRSS50Q9UI38 385 aa14.4□□□□□ -0.1
CPSF6-203ENST00000456847 FREM1Q5H8C1 2179 aa14.4□□□□□ -0.1
CPSF6-203ENST00000456847 ABCA4P78363 2273 aa14.4□□□□□ -0.11
CPSF6-203ENST00000456847 GCM2O75603 506 aaPredicted RBP14.39□□□□□ -0.11
CPSF6-203ENST00000456847 PGM3O95394 542 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 THBDP07204 575 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 IDUAP35475 653 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 SLC35A1P78382 337 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 CDK6Q00534 326 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 BEX5Q5H9J7 111 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 SFRP5Q5T4F7 317 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 DHDDSQ86SQ9 333 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 SERPINA11Q86U17 422 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 KRT73Q86Y46 540 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 NOSIPQ9Y314 301 aaKnown RBP14.39□□□□□ -0.11
CPSF6-203ENST00000456847 NDUFAF1Q9Y375 327 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.39□□□□□ -0.11
CPSF6-203ENST00000456847 ZC3H12DA2A288 527 aaKnown RBP14.39□□□□□ -0.11
CPSF6-203ENST00000456847 FRS3O43559 492 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 TROVE2P10155 538 aaKnown RBP eCLIP14.39□□□□□ -0.11
CPSF6-203ENST00000456847 PRG2P13727 222 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 ACAA2P42765 397 aaKnown RBP14.39□□□□□ -0.11
CPSF6-203ENST00000456847 MAP2K6P52564 334 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 DEFB113Q30KQ7 82 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 REEP3Q6NUK4 255 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 MBD6Q96DN6 1003 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 HS3ST6Q96QI5 342 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 ALPK1Q96QP1 1244 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 SPATA5L1Q9BVQ7 753 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 TMEM120AQ9BXJ8 343 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 ADAM19Q9H013 955 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 TRAPPC4Q9Y296 219 aa14.39□□□□□ -0.11
CPSF6-203ENST00000456847 HRNRQ86YZ3 2850 aaPredicted RBP14.38□□□□□ -0.11
CPSF6-203ENST00000456847 TRBV5-3A0A0A0MS03 114 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 GPR171O14626 319 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 EIF1BO60739 113 aaKnown RBP14.38□□□□□ -0.11
CPSF6-203ENST00000456847 IMPDH2P12268 514 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 ETS2P15036 469 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 FPR1P21462 350 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 SCARB2Q14108 478 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 P2RY6Q15077 328 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 PDK3Q15120 406 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 HSP90B2PQ58FF3 399 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 Q6ZT83 130 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 BHLHA15Q7RTS1 189 aaPredicted RBP14.38□□□□□ -0.11
CPSF6-203ENST00000456847 CCDC103Q8IW40 242 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 UBE2J2Q8N2K1 259 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 C10orf111Q8N326 155 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 CPPED1Q9BRF8 314 aaPredicted RBP14.38□□□□□ -0.11
CPSF6-203ENST00000456847 IKZF5Q9H5V7 419 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 ZNF385DQ9H6B1 395 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 RPS6KB2Q9UBS0 482 aa14.38□□□□□ -0.11
CPSF6-203ENST00000456847 IGKV3D-15A0A087WSY6 115 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 ZNF716A6NP11 495 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 ZNF814B7Z6K7 855 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 LYZL6O75951 148 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 SLC6A2P23975 617 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 NR1H2P55055 460 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 BNIP2Q12982 314 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 ITGADQ13349 1161 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 NFYCQ13952 458 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 CAPRIN1Q14444 709 aaKnown RBP14.37□□□□□ -0.11
CPSF6-203ENST00000456847 OR7A5Q15622 319 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 APH1AQ96BI3 265 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 PLPPR2Q96GM1 343 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 TAPBPLQ9BX59 468 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 CXXC4Q9H2H0 198 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 ZNF446Q9NWS9 450 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 PRDM4Q9UKN5 801 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 ANGPT4Q9Y264 503 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 CHST2Q9Y4C5 530 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 AKAP9Q99996 3911 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 IGHV3-9P01782 118 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 GPIP06744 558 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 EDNRAP25101 427 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 PRKAR1BP31321 381 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 NCALDP61601 193 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 HOXC5Q00444 222 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 SF3A3Q12874 501 aaKnown RBP eCLIP14.37□□□□□ -0.116e-6■■■□□ 15.2
CPSF6-203ENST00000456847 CEACAM7Q14002 265 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 STK11Q15831 433 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 CYP51A1Q16850 503 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 CASP12Q6UXS9 341 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 POTEKPQ9BYX7 375 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 TMEM38AQ9H6F2 299 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 FGFR1OP2Q9NVK5 253 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 SLC13A4Q9UKG4 626 aa14.37□□□□□ -0.11
CPSF6-203ENST00000456847 A8MVM7 634 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 RAMP1O60894 148 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 MRPL33O75394 65 aaKnown RBP14.36□□□□□ -0.11
CPSF6-203ENST00000456847 VIMP08670 466 aaKnown RBP14.36□□□□□ -0.11
CPSF6-203ENST00000456847 GPX2P18283 190 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 CD53P19397 219 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 AQP1P29972 269 aa14.36□□□□□ -0.11
CPSF6-203ENST00000456847 SLC16A1P53985 500 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms