RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 EIF3HO15372 352 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 TSPAN13O95857 204 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 LGALS2P05162 132 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 IGHV1-2P23083 117 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 CDKN1BP46527 198 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 RPL29P47914 159 aaKnown RBP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 CSNK1EP49674 416 aaKnown RBP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 HMGCS2P54868 508 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 CLDN8P56748 225 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 EIF3EP60228 445 aaKnown RBP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 IRX3P78415 501 aaPredicted RBP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 IRF8Q02556 426 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 MERTKQ12866 999 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 SLC10A1Q14973 349 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 CHRNA6Q15825 494 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 CNPY1Q3B7I2 92 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 SBK1Q52WX2 424 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 PIP5KL1Q5T9C9 394 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 SLC8B1Q6J4K2 584 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 CCDC137Q6PK04 289 aaKnown RBP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 ANGPTL8Q6UXH0 198 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 SLC25A48Q6ZT89 311 aaKnown RBP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 SCD5Q86SK9 330 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 C17orf82Q86X59 251 aaPredicted RBP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 PQLC3Q8N755 202 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 TPRX1Q8N7U7 411 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 FAM81AQ8TBF8 368 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 DNASE2BQ8WZ79 361 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 MS4A14Q96JA4 679 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 SERAC1Q96JX3 654 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 MCCC1Q96RQ3 725 aaPredicted RBP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 CLCC1Q96S66 551 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 KRTAP4-7Q9BYR0 210 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 BARHL1Q9BZE3 327 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 RACGAP1Q9H0H5 632 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 SLITRK2Q9H156 845 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 HEXA-AS1Q9H8Q6 139 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 TIGARQ9NQ88 270 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 NUDT15Q9NV35 164 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 PSMC3IPQ9P2W1 217 aaPredicted RBP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 PITPNC1Q9UKF7 332 aa3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 TDRD15B5MCY1 1934 aaKnown RBP3.26□□□□□ -1.89
HMGN3P1-201ENST00000453847 TRAV25A0A0B4J276 109 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 TUBAL3A6NHL2 446 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 A8MX80 341 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 FAM25EA8MYX2 175 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 B4DXG7 233 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 SUPT3HB4E1H0 165 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 DCTN6O00399 190 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 CABYRO75952 493 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 UBTFL1P0CB47 393 aaPredicted RBP3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 GCFC2P16383 781 aaKnown RBP3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 ADORA2BP29275 332 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 MAGEA1P43355 309 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 NAMPTP43490 491 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 RAB9AP51151 201 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 EFNA3P52797 238 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 DOC2AQ14183 400 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 OXA1LQ15070 435 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 TGFBIQ15582 683 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 TGIF1Q15583 401 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 DGUOKQ16854 277 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 ZC2HC1BQ5TFG8 222 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 SLC22A10Q63ZE4 541 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 TMEM53Q6P2H8 277 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 LRRC31Q6UY01 552 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 ZNF600Q6ZNG1 722 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 OTUD6AQ7L8S5 288 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 ZNF248Q8NDW4 579 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 OR2A12Q8NGT7 310 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 PLPPR1Q8TBJ4 325 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 MRPS31Q92665 395 aaKnown RBP3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 UFD1Q92890 307 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 CXorf40BQ96DE9 158 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 ZNF641Q96N77 438 aaPredicted RBP3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 KLHDC3Q9BQ90 382 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 REEP4Q9H6H4 257 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 NHEJ1Q9H9Q4 299 aaPredicted RBP3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 THUMPD1Q9NXG2 353 aaKnown RBP3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 TBC1D24Q9ULP9 559 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 NOTCH4Q99466 2003 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 PLEKHH1Q9ULM0 1364 aa3.25□□□□□ -1.89
HMGN3P1-201ENST00000453847 GON4LQ3T8J9 2241 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 A0A0G2JRQ6 117 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 TRBV11-1A0A0K0K1C0 115 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 EFCAB7A8K855 629 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 SRRM5B3KS81 715 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 SPECC1L-ADORA2AF8WAN1 911 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 GOLGA8SH3BPF8 625 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 H7C423 109 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 CLOCKO15516 846 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 OR7A10O76100 309 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 H6PDO95479 791 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 STAMBPO95630 424 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 OXSR1O95747 527 aaPredicted RBP3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 SERPIND1P05546 499 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 SLC35E2P0CK97 266 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 RALBP11234 206 aa3.24□□□□□ -1.89
HMGN3P1-201ENST00000453847 OTX1P32242 354 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms