RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 RAB6CQ53S08 254 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 LRRC73Q5JTD7 316 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 BLOC1S3Q6QNY0 202 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 LYPD8Q6UX82 237 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 MCATQ8IVS2 390 aaKnown RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 OR4N5Q8IXE1 308 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 KDM8Q8N371 416 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 BCORP1Q8N888 145 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 TCEANCQ8N8B7 351 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 ZNF454Q8N9F8 522 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 SPPL3Q8TCT6 385 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 CA5BP1Q8WTZ4 195 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 SLC29A1Q99808 456 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 DPCDQ9BVM2 203 aaPredicted RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 RAB6CQ9H0N0 254 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 GORASP2Q9H8Y8 452 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 DNMT3BQ9UBC3 853 aaKnown RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 C17orf112F2Z3M2 114 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 CLIC1O00299 241 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 KCNAB3O43448 404 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 JTBO76095 146 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 MMP7P09237 267 aaPredicted RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 PRKCHP24723 683 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 CSNK1A1P48729 337 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 ENTPD1P49961 510 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 RAB38P57729 211 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 SLC26A5P58743 744 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 GABREP78334 506 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 LTB4RQ15722 352 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 H3F3CQ6NXT2 135 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 DPPA3Q6W0C5 159 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 ZNF101Q8IZC7 436 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 CLIP4Q8N3C7 705 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 EXD3Q8N9H8 876 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 TSACCQ96A04 125 aaPredicted RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 MKRN2Q9H000 416 aaKnown RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 POMPQ9Y244 141 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 FAM96BQ9Y3D0 163 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 PLRG1O43660 514 aaKnown RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 DOK2O60496 412 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 BCHEP06276 602 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 GP1BAP07359 652 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 PNLIPP16233 465 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 CKMT2P17540 419 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 ELAVL4P26378 380 aaKnown RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 SLC5A2P31639 672 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 RPS19P39019 145 aaKnown RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 CDKN1CP49918 316 aaPredicted RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 ZNF133P52736 654 aaPredicted RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 GK2Q14410 553 aaPredicted RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 CHRFAM7AQ494W8 412 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 SLC35D2Q76EJ3 337 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 ENTHD1Q8IYW4 607 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 ZNF764Q96H86 408 aaPredicted RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 TMEM80Q96HE8 168 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 SLC46A1Q96NT5 459 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 MICU1Q9BPX6 476 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 KLF16Q9BXK1 252 aaPredicted RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 LIN7BQ9HAP6 207 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 MED9Q9NWA0 146 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 STEAP1Q9UHE8 339 aa3.36□□□□□ -1.87
ATM-203ENST00000452508 STRAPQ9Y3F4 350 aaKnown RBP3.36□□□□□ -1.87
ATM-203ENST00000452508 SIGLEC6O43699 453 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 TEAD1P28347 426 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 SOX18P35713 384 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 CPOXP36551 454 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 ARR3P36575 388 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 GSK3AP49840 483 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 TPMTP51580 245 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 AFF1P51825 1210 aaKnown RBP3.35□□□□□ -1.87
ATM-203ENST00000452508 SNRPD2P62316 118 aaKnown RBP3.35□□□□□ -1.87
ATM-203ENST00000452508 GBE1Q04446 702 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 ZNF252P-AS1Q0IIN9 211 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 TARDBPQ13148 414 aaKnown RBP eCLIP3.35□□□□□ -1.87
ATM-203ENST00000452508 ELAVL1Q15717 326 aaKnown RBP3.35□□□□□ -1.87
ATM-203ENST00000452508 FAM122BQ7Z309 247 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 PIWIL3Q7Z3Z3 882 aaKnown RBP3.35□□□□□ -1.87
ATM-203ENST00000452508 FOXRED2Q8IWF2 684 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 CNEP1R1Q8N9A8 125 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 TSEN2Q8NCE0 465 aaKnown RBP3.35□□□□□ -1.87
ATM-203ENST00000452508 GRHL3Q8TE85 626 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 GNPNAT1Q96EK6 184 aaPredicted RBP3.35□□□□□ -1.87
ATM-203ENST00000452508 OR14A2Q96R54 314 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 NMUR2Q9GZQ4 415 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 GALNT9Q9HCQ5 603 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 H0Y8G0 127 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 H2BFMP0C1H6 154 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 RAB3BP20337 219 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 HLA-DMAP28067 261 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 SEMG2Q02383 582 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 TLE4Q04727 773 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 TGFBIQ15582 683 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 IL34Q6ZMJ4 242 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 ZCCHC23Q6ZST2 131 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 TAS1R1Q7RTX1 841 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 TMEM151AQ8N4L1 468 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 STEAP2Q8NFT2 490 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 BEX2Q9BXY8 128 aa3.35□□□□□ -1.87
ATM-203ENST00000452508 NDRG4Q9ULP0 352 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms