RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TMEM72A0PK05 275 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 ZC3H12DA2A288 527 aaKnown RBP11.02□□□□□ -0.65
CPSF4-208ENST00000452047 FAM234BA2RU67 622 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 ANP32DO95626 131 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 BCHEP06276 602 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 INHBBP09529 407 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 IMPDH2P12268 514 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 HOXB4P17483 251 aaPredicted RBP11.02□□□□□ -0.65
CPSF4-208ENST00000452047 CCNA2P20248 432 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 ACAA2P42765 397 aaKnown RBP11.02□□□□□ -0.65
CPSF4-208ENST00000452047 CRATP43155 626 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 PTH2RP49190 550 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 MAP2K6P52564 334 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 CRISP3P54108 245 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 DSTNP60981 165 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 KRTAP21-3Q3LHN1 58 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 C6orf10Q5SRN2 563 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 RNF220Q5VTB9 566 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 ZNF836Q6ZNA1 936 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 YTHDF3Q7Z739 585 aaKnown RBP11.02□□□□□ -0.65
CPSF4-208ENST00000452047 VRK2Q86Y07 508 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 CCDC103Q8IW40 242 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 ZNF440Q8IYI8 595 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 ZNF100Q8IYN0 542 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 OR52P1PQ8NH57 321 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 AKAP1Q92667 903 aaKnown RBP eCLIP11.02□□□□□ -0.65
CPSF4-208ENST00000452047 COX4I2Q96KJ9 171 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 Q96MF0 132 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 ADAM19Q9H013 955 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 PAIP1Q9H074 479 aaKnown RBP11.02□□□□□ -0.65
CPSF4-208ENST00000452047 ESRP2Q9H6T0 727 aaKnown RBP11.02□□□□□ -0.65
CPSF4-208ENST00000452047 SLCO1B3Q9NPD5 702 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 NGBQ9NPG2 151 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 ZNF701Q9NV72 531 aaPredicted RBP11.02□□□□□ -0.65
CPSF4-208ENST00000452047 CALML5Q9NZT1 146 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 CHST2Q9Y4C5 530 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 RNF115Q9Y4L5 304 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 PCDHB14Q9Y5E9 798 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 TLN2Q9Y4G6 2542 aa11.02□□□□□ -0.65
CPSF4-208ENST00000452047 GPR171O14626 319 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 TMCC2O75069 709 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 PGM3O95394 542 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 TGDSO95455 350 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 THBS1P07996 1170 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 GKN3PP0CG01 181 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 BMP2P12643 396 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 OR2B6P58173 313 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 BSPH1Q075Z2 132 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 GLIPR1L2Q4G1C9 344 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 LIN52Q52LA3 116 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 TTMPQ5BVD1 217 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 RPS26P11Q5JNZ5 115 aaPredicted RBP11.01□□□□□ -0.65
CPSF4-208ENST00000452047 TIMM23BQ5SRD1 257 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 FBXW9Q5XUX1 488 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 SLC2A7Q6PXP3 512 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 CIARTQ8N365 385 aaPredicted RBP11.01□□□□□ -0.65
CPSF4-208ENST00000452047 ZNF433Q8N7K0 673 aaPredicted RBP11.01□□□□□ -0.65
CPSF4-208ENST00000452047 TMEM171Q8WVE6 324 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 APH1AQ96BI3 265 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 DDIT4LQ96D03 193 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 TMEM19Q96HH6 336 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 ATP6V1G3Q96LB4 118 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 EBF4Q9BQW3 602 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 TCF7L2Q9NQB0 619 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 THUMPD1Q9NXG2 353 aaKnown RBP11.01□□□□□ -0.65
CPSF4-208ENST00000452047 MALT1Q9UDY8 824 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 PRDM4Q9UKN5 801 aa11.01□□□□□ -0.65
CPSF4-208ENST00000452047 ZNF443Q9Y2A4 671 aaPredicted RBP11.01□□□□□ -0.65
CPSF4-208ENST00000452047 NOSIPQ9Y314 301 aaKnown RBP11.01□□□□□ -0.65
CPSF4-208ENST00000452047 PLCE1Q9P212 2302 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 DPRXA6NFQ7 191 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 OR5H1A6NKK0 313 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 H7C1Q1 480 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 POLR3GO15318 223 aaPredicted RBP11□□□□□ -0.65
CPSF4-208ENST00000452047 CLOCKO15516 846 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 EIF1BO60739 113 aaKnown RBP11□□□□□ -0.65
CPSF4-208ENST00000452047 IGHV3-9P01782 118 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 CD3EP07766 207 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 NUDT7P0C024 238 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 DANCRP0C864 163 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 PRG2P13727 222 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 UQCRBP14927 111 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 GGT1P19440 569 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 ADSLP30566 484 aaPredicted RBP11□□□□□ -0.65
CPSF4-208ENST00000452047 IDH3AP50213 366 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 SLC35A1P78382 337 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 FADDQ13158 208 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 CAPRIN1Q14444 709 aaKnown RBP11□□□□□ -0.65
CPSF4-208ENST00000452047 SLC17A1Q14916 467 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 PPA1Q15181 289 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 RGNQ15493 299 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 STK11Q15831 433 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 ZNF672Q499Z4 452 aaPredicted RBP11□□□□□ -0.65
CPSF4-208ENST00000452047 PAQR6Q6TCH4 344 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 SSX8Q7RTT4 187 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 P2RY8Q86VZ1 359 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 FUNDC1Q8IVP5 155 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 MSRB3Q8IXL7 192 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 CLIP4Q8N3C7 705 aa11□□□□□ -0.65
CPSF4-208ENST00000452047 KBTBD8Q8NFY9 601 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms