RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 OR6S1Q8NH40 331 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 SLC25A43Q8WUT9 341 aaPredicted RBP17.42■□□□□ 0.38
RPS28-202ENST00000449223 GTPBP3Q969Y2 492 aaKnown RBP17.42■□□□□ 0.38
RPS28-202ENST00000449223 FAM46AQ96IP4 442 aaKnown RBP17.42■□□□□ 0.38
RPS28-202ENST00000449223 TOR3AQ9H497 397 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 SPIN1Q9Y657 262 aaPredicted RBP17.42■□□□□ 0.38
RPS28-202ENST00000449223 TMEM72A0PK05 275 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 H0YAE9 185 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 CDC42EP2O14613 210 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 EFNA2O43921 213 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 MITFO75030 526 aaPredicted RBP17.42■□□□□ 0.38
RPS28-202ENST00000449223 TP53P04637 393 aaPredicted RBP17.42■□□□□ 0.38
RPS28-202ENST00000449223 OSMP13725 252 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 POU2F1P14859 743 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 CLK1P49759 484 aaKnown RBP17.42■□□□□ 0.38
RPS28-202ENST00000449223 ESRRGP62508 458 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 ALDH6A1Q02252 535 aaKnown RBP17.42■□□□□ 0.38
RPS28-202ENST00000449223 CRYZQ08257 329 aaKnown RBP17.42■□□□□ 0.38
RPS28-202ENST00000449223 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.42■□□□□ 0.38
RPS28-202ENST00000449223 Q6ZS92 163 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 RASSF6Q6ZTQ3 369 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 CLDN22Q8N7P3 220 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 TFAP2CQ92754 450 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 MBOAT4Q96T53 435 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 PIGQQ9BRB3 760 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 ADI1Q9BV57 179 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 GRIP2Q9C0E4 1043 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 SERINC1Q9NRX5 453 aa17.42■□□□□ 0.38
RPS28-202ENST00000449223 FREM3P0C091 2139 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 TRAV36DV7A0A075B6V5 113 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 KPNA4O00629 521 aaPredicted RBP17.41■□□□□ 0.38
RPS28-202ENST00000449223 SLC16A6O15403 523 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 MAKP20794 623 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 GPR4P46093 362 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 SLC9A3P48764 834 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 B3GALT5-AS1P59052 145 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 CXADRP78310 365 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 ADARB1P78563 741 aaKnown RBP17.41■□□□□ 0.38
RPS28-202ENST00000449223 NPRL3Q12980 569 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 SLC36A3Q495N2 470 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 SLC46A3Q7Z3Q1 461 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 PTDSS2Q9BVG9 487 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 POTEKPQ9BYX7 375 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 IL20Q9NYY1 176 aa17.41■□□□□ 0.38
RPS28-202ENST00000449223 OR2M5A3KFT3 312 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 LINC01387J3KSC0 135 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 PDGFAP04085 211 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 PTNP21246 168 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 GDF1P27539 372 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 ZNF74Q16587 644 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 FAM69AQ5T7M9 428 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 GALNT5Q7Z7M9 940 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 SLC22A16Q86VW1 577 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 DHRSXQ8N5I4 330 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 TMEM251Q8N6I4 163 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 FAM83FQ8NEG4 500 aaPredicted RBP17.4■□□□□ 0.38
RPS28-202ENST00000449223 DDIT4LQ96D03 193 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 KTI12Q96EK9 354 aaPredicted RBP17.4■□□□□ 0.38
RPS28-202ENST00000449223 SGTBQ96EQ0 304 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 TUBD1Q9UJT1 453 aa17.4■□□□□ 0.38
RPS28-202ENST00000449223 ZZEF1O43149 2961 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 ZC3H12DA2A288 527 aaKnown RBP17.39■□□□□ 0.37
RPS28-202ENST00000449223 SHISA8B8ZZ34 492 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 OR2T1O43869 369 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 MT-ATP6P00846 226 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 TSPAN19P0C672 248 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 CAPGP40121 348 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 GFRA1P56159 465 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 RPS4XP62701 263 aaKnown RBP17.39■□□□□ 0.37
RPS28-202ENST00000449223 FOXK1P85037 733 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 ZNF169Q14929 603 aaPredicted RBP17.39■□□□□ 0.37
RPS28-202ENST00000449223 ANKDD1AQ495B1 522 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 SYT14P1Q58G82 188 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 WLSQ5T9L3 541 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 C1orf140Q5VVS0 124 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 RPL13AP3Q6NVV1 102 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 POMZP3Q6PJE2 187 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 ZNF620Q6ZNG0 422 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.39■□□□□ 0.37
RPS28-202ENST00000449223 P3H2Q8IVL5 708 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 SLC43A2Q8N370 569 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 FAM98AQ8NCA5 519 aaKnown RBP17.39■□□□□ 0.37
RPS28-202ENST00000449223 EXTL1Q92935 676 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 TAAR8Q969N4 342 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 ABHD17AQ96GS6 310 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 UBL7Q96S82 380 aaPredicted RBP17.39■□□□□ 0.37
RPS28-202ENST00000449223 ZDHHC11Q9H8X9 412 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 FKRPQ9H9S5 495 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 ACKR4Q9NPB9 350 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 FAM118AQ9NWS6 357 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 ZNF229Q9UJW7 825 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 SIGLEC7Q9Y286 467 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 AP4B1Q9Y6B7 739 aa17.39■□□□□ 0.37
RPS28-202ENST00000449223 EFCAB9A8MZ26 197 aa17.38■□□□□ 0.37
RPS28-202ENST00000449223 ACOT7O00154 380 aa17.38■□□□□ 0.37
RPS28-202ENST00000449223 OR7A10O76100 309 aa17.38■□□□□ 0.37
RPS28-202ENST00000449223 ASAH2BP0C7U1 165 aa17.38■□□□□ 0.37
RPS28-202ENST00000449223 IL11P20809 199 aa17.38■□□□□ 0.37
RPS28-202ENST00000449223 CHMP24386 653 aa17.38■□□□□ 0.37
RPS28-202ENST00000449223 RAC1P63000 192 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms