RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 OR52E4Q8NGH9 312 aa24.89■■□□□ 1.58
CBX4-202ENST00000448310 SLC38A1Q9H2H9 487 aa24.89■■□□□ 1.58
CBX4-202ENST00000448310 TMEM181Q9P2C4 612 aa24.89■■□□□ 1.58
CBX4-202ENST00000448310 BTNL2Q9UIR0 455 aa24.89■■□□□ 1.58
CBX4-202ENST00000448310 TMED7Q9Y3B3 224 aa24.89■■□□□ 1.58
CBX4-202ENST00000448310 SLC25A15Q9Y619 301 aa24.89■■□□□ 1.58
CBX4-202ENST00000448310 GOLGA8QA0A0J9YX86 632 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 TMEM72A0PK05 275 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 GOLGA8OA6NCC3 632 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 CCDC154A6NI56 674 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 E7EQL1 145 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 GOLGA8NF8WBI6 632 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 GPR171O14626 319 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 DNPH1O43598 174 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 SSX4O60224 188 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 IL12AP29459 219 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 CLK1P49759 484 aaKnown RBP24.88■■□□□ 1.57
CBX4-202ENST00000448310 C9orf135Q5VTT2 229 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 TMEM108Q6UXF1 575 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 SSX8Q7RTT4 187 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 PANX1Q96RD7 426 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 C1QTNF6Q9BXI9 259 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 GRIP2Q9C0E4 1043 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 KCNK9Q9NPC2 374 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 TAS2R16Q9NYV7 291 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 MALT1Q9UDY8 824 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 OSGIN1Q9UJX0 560 aa24.88■■□□□ 1.57
CBX4-202ENST00000448310 SNUPNO95149 360 aaKnown RBP24.87■■□□□ 1.57
CBX4-202ENST00000448310 GSNP06396 782 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 ITGA5P08648 1049 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 IMPDH2P12268 514 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 MAGEA8P43361 318 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 BST1Q10588 318 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 AGAP6Q5VW22 663 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 SLC22A25Q6T423 547 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 CASP12Q6UXS9 341 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 LRRC34Q8IZ02 419 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 PNPT1Q8TCS8 783 aaKnown RBP24.87■■□□□ 1.57
CBX4-202ENST00000448310 TRNT1Q96Q11 434 aaKnown RBP24.87■■□□□ 1.57
CBX4-202ENST00000448310 PAIP2Q9BPZ3 127 aaKnown RBP24.87■■□□□ 1.57
CBX4-202ENST00000448310 CACNG6Q9BXT2 260 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 BARX1Q9HBU1 254 aaPredicted RBP24.87■■□□□ 1.57
CBX4-202ENST00000448310 AIG1Q9NVV5 245 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 POU2F3Q9UKI9 436 aa24.87■■□□□ 1.57
CBX4-202ENST00000448310 FBN1P35555 2871 aaKnown RBP24.87■■□□□ 1.57
CBX4-202ENST00000448310 AGAP5A6NIR3 686 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 M0R1B8 84 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 SDHDO14521 159 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 TP53P04637 393 aaPredicted RBP24.86■■□□□ 1.57
CBX4-202ENST00000448310 CD40P25942 277 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 FKBP2P26885 142 aaKnown RBP24.86■■□□□ 1.57
CBX4-202ENST00000448310 TACR3P29371 465 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 HTR3AP46098 478 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 POLR2HP52434 150 aaKnown RBP24.86■■□□□ 1.57
CBX4-202ENST00000448310 IRX1P78414 480 aaPredicted RBP24.86■■□□□ 1.57
CBX4-202ENST00000448310 H3F3AP84243 136 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 GABRA6Q16445 453 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 COX20Q5RI15 118 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 OGFOD2Q6N063 350 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 B3GLCTQ6Y288 498 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 ZNF621Q6ZSS3 439 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 WDR60Q8WVS4 1066 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 RADILQ96JH8 1075 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 TRAPPC4Q9Y296 219 aa24.86■■□□□ 1.57
CBX4-202ENST00000448310 ZC3H12DA2A288 527 aaKnown RBP24.85■■□□□ 1.57
CBX4-202ENST00000448310 PTAFRP25105 342 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 TTKP33981 857 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 KLHL17Q6TDP4 642 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 LRRC74BQ6ZQY2 392 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 CMIPQ8IY22 773 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 KIRREL3Q8IZU9 778 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 HTRA1Q92743 480 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 DDIT4LQ96D03 193 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 MUS81Q96NY9 551 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 OR52E6Q96RD3 313 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 YAE1D1Q9NRH1 226 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 MGAT4BQ9UQ53 548 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 FLVCR1Q9Y5Y0 555 aa24.85■■□□□ 1.57
CBX4-202ENST00000448310 PGRP06401 933 aa24.84■■□□□ 1.57
CBX4-202ENST00000448310 SLC35A1P78382 337 aa24.84■■□□□ 1.57
CBX4-202ENST00000448310 CEP85LQ5SZL2 805 aa24.84■■□□□ 1.57
CBX4-202ENST00000448310 MRPL2Q5T653 305 aaKnown RBP24.84■■□□□ 1.57
CBX4-202ENST00000448310 C11orf71Q6IPW1 123 aa24.84■■□□□ 1.57
CBX4-202ENST00000448310 TRIML2Q8N7C3 387 aa24.84■■□□□ 1.57
CBX4-202ENST00000448310 DHRS9Q9BPW9 319 aa24.84■■□□□ 1.57
CBX4-202ENST00000448310 SLC7A10Q9NS82 523 aa24.84■■□□□ 1.57
CBX4-202ENST00000448310 IGHV4-30-2A0A087WSY4 118 aa24.83■■□□□ 1.57
CBX4-202ENST00000448310 PDLIM1O00151 329 aa24.83■■□□□ 1.57
CBX4-202ENST00000448310 ZNF208O43345 1280 aa24.83■■□□□ 1.57
CBX4-202ENST00000448310 CD5LO43866 347 aa24.83■■□□□ 1.57
CBX4-202ENST00000448310 NR2F1P10589 423 aa24.83■■□□□ 1.57
CBX4-202ENST00000448310 IL7RP16871 459 aa24.83■■□□□ 1.57
CBX4-202ENST00000448310 RPS4Y1P22090 263 aaKnown RBP24.83■■□□□ 1.57
CBX4-202ENST00000448310 NUDT6P53370 316 aa24.83■■□□□ 1.57
CBX4-202ENST00000448310 NRF1Q16656 503 aa24.83■■□□□ 1.57
CBX4-202ENST00000448310 CXXC5Q7LFL8 322 aaKnown RBP24.83■■□□□ 1.57
CBX4-202ENST00000448310 ANKRD42Q8N9B4 389 aa24.83■■□□□ 1.57
CBX4-202ENST00000448310 WDR31Q8NA23 367 aa24.83■■□□□ 1.57
CBX4-202ENST00000448310 ADAD1Q96M93 576 aaKnown RBP24.83■■□□□ 1.57
CBX4-202ENST00000448310 NAA11Q9BSU3 229 aaPredicted RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms