RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 BLOC1S3Q6QNY0 202 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 ZNF704Q6ZNC4 412 aaPredicted RBP17.8■□□□□ 0.44
LRCH3-208ENST00000443727 UBE2J2Q8N2K1 259 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 CADM2Q8N3J6 435 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 SPDL1Q96EA4 605 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 USB1Q9BQ65 265 aaKnown RBP17.8■□□□□ 0.44
LRCH3-208ENST00000443727 VIPAS39Q9H9C1 493 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 TRAPPC4Q9Y296 219 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 NOSIPQ9Y314 301 aaKnown RBP17.8■□□□□ 0.44
LRCH3-208ENST00000443727 IGKV3D-15A0A087WSY6 115 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 TMEM72A0PK05 275 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 EIF1BO60739 113 aaKnown RBP17.79■□□□□ 0.44
LRCH3-208ENST00000443727 LYZL6O75951 148 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 MAP2K6P52564 334 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 FADDQ13158 208 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 PDK3Q15120 406 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 STK11Q15831 433 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 RNF220Q5VTB9 566 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 CCDC103Q8IW40 242 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 WFDC11Q8NEX6 87 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 APH1AQ96BI3 265 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 PIP5K1AQ99755 562 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 NAA11Q9BSU3 229 aaPredicted RBP17.79■□□□□ 0.44
LRCH3-208ENST00000443727 POTEKPQ9BYX7 375 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 A4GALTQ9NPC4 353 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 IFT52Q9Y366 437 aa17.79■□□□□ 0.44
LRCH3-208ENST00000443727 IGHV3-9P01782 118 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 THBS1P07996 1170 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 NUDT7P0C024 238 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 TAB1Q15750 504 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 AGKQ53H12 422 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 ZNF311Q5JNZ3 666 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 SHEQ5VZ18 495 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 WBP2NLQ6ICG8 309 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 FUNDC1Q8IVP5 155 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 CLIP4Q8N3C7 705 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 MAL2Q969L2 176 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 SPATA9Q9BWV2 254 aa17.78■□□□□ 0.44
LRCH3-208ENST00000443727 ESRP2Q9H6T0 727 aaKnown RBP17.78■□□□□ 0.44
LRCH3-208ENST00000443727 SETD2Q9BYW2 2564 aaPredicted RBP17.78■□□□□ 0.44
LRCH3-208ENST00000443727 ZNF716A6NP11 495 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 CLOCKO15516 846 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 MRPL33O75394 65 aaKnown RBP17.77■□□□□ 0.44
LRCH3-208ENST00000443727 CNOT4O95628 575 aaKnown RBP17.77■□□□□ 0.44
LRCH3-208ENST00000443727 PPIBP23284 216 aaKnown RBP17.77■□□□□ 0.44
LRCH3-208ENST00000443727 EDNRAP25101 427 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 HOXC12P31275 282 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 IRX1P78414 480 aaPredicted RBP17.77■□□□□ 0.44
LRCH3-208ENST00000443727 SQLEQ14534 574 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 BBS10Q8TAM1 723 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 CKAP2Q8WWK9 683 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 MUCL1Q96DR8 90 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 THOC1Q96FV9 657 aaKnown RBP17.77■□□□□ 0.44
LRCH3-208ENST00000443727 MAGEB18Q96M61 343 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 ADAM19Q9H013 955 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 RABEP2Q9H5N1 569 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 PRDM4Q9UKN5 801 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 C2CD3Q4AC94 2353 aa17.77■□□□□ 0.44
LRCH3-208ENST00000443727 ZC3H12DA2A288 527 aaKnown RBP17.76■□□□□ 0.43
LRCH3-208ENST00000443727 PLAUP00749 431 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 GPIP06744 558 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 CD3EP07766 207 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 IMPDH2P12268 514 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 GGT1P19440 569 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 IDUAP35475 653 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 ACAA2P42765 397 aaKnown RBP17.76■□□□□ 0.43
LRCH3-208ENST00000443727 ATP4BP51164 291 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 SLC16A1P53985 500 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 Q5PR19 223 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 GCNT6Q5T4J0 391 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 PRAMEF8Q5VWM4 474 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 PRAMEF7Q5VXH5 474 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 FBXW9Q5XUX1 488 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 BCL2L10Q9HD36 194 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 TMEM45AQ9NWC5 275 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 SLC25A37Q9NYZ2 338 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 SLAMF8Q9P0V8 285 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.76■□□□□ 0.43
LRCH3-208ENST00000443727 RNF115Q9Y4L5 304 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 ROS1P08922 2347 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 ACANP16112 2415 aa17.76■□□□□ 0.43
LRCH3-208ENST00000443727 FREM1Q5H8C1 2179 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 CIB4A0PJX0 185 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 CCT8L1PA6NM43 557 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 HS3ST1O14792 307 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 RAMP1O60894 148 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 PRG2P13727 222 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 H2AFXP16104 143 aaPredicted RBP17.75■□□□□ 0.43
LRCH3-208ENST00000443727 IGHV1-2P23083 117 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 ADSLP30566 484 aaPredicted RBP17.75■□□□□ 0.43
LRCH3-208ENST00000443727 CEACAM7Q14002 265 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 PPA1Q15181 289 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 OR7A5Q15622 319 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 PAGE3Q5JUK9 113 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 LRIF1Q5T3J3 769 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 CASP12Q6UXS9 341 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 SERPINA11Q86U17 422 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 LSRQ86X29 649 aaPredicted RBP17.75■□□□□ 0.43
LRCH3-208ENST00000443727 LRRC75A-AS1Q8N1F1 130 aa17.75■□□□□ 0.43
LRCH3-208ENST00000443727 NFKBIDQ8NI38 313 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms