RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 REEP1Q9H902 201 aa14.21□□□□□ -0.13
USP40-206ENST00000443711 S100A14Q9HCY8 104 aa14.21□□□□□ -0.13
USP40-206ENST00000443711 TMCC3Q9ULS5 477 aa14.21□□□□□ -0.13
USP40-206ENST00000443711 HDGFL3Q9Y3E1 203 aa14.21□□□□□ -0.13
USP40-206ENST00000443711 IGKV1D-42A0A075B6H8 117 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 A0A0J9YW62 118 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 ZC3H12DA2A288 527 aaKnown RBP14.2□□□□□ -0.14
USP40-206ENST00000443711 TNFRSF11BO00300 401 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 EIF1AYO14602 144 aaKnown RBP14.2□□□□□ -0.14
USP40-206ENST00000443711 SEC14L5O43304 696 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 AHSA1O95433 338 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 LDLRP01130 860 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 ABOP16442 354 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 SHC1P29353 583 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 CLDN18P56856 261 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 CLDN20P56880 219 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 RPS3AP61247 264 aaKnown RBP14.2□□□□□ -0.14
USP40-206ENST00000443711 ELF3P78545 371 aaPredicted RBP14.2□□□□□ -0.14
USP40-206ENST00000443711 SRYQ05066 204 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 GK3PQ14409 553 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 C1orf140Q5VVS0 124 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 CHMP1BQ7LBR1 199 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 FGD2Q7Z6J4 655 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 GGNQ86UU5 652 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 CHERPQ8IWX8 916 aaKnown RBP14.2□□□□□ -0.14
USP40-206ENST00000443711 RNF113BQ8IZP6 322 aaKnown RBP14.2□□□□□ -0.14
USP40-206ENST00000443711 ST6GALNAC3Q8NDV1 305 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 TMEM255BQ8WV15 326 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 ACOT11Q8WXI4 607 aaPredicted RBP14.2□□□□□ -0.14
USP40-206ENST00000443711 ALPK1Q96QP1 1244 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 OR5B2Q96R09 309 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 ZNF426Q9BUY5 554 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 TNFRSF10DQ9UBN6 386 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 CAMK2AQ9UQM7 478 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 MED31Q9Y3C7 131 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 FAM208BQ5VWN6 2430 aa14.2□□□□□ -0.14
USP40-206ENST00000443711 TRAV36DV7A0A075B6V5 113 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 A0A087WUU8 490 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 A0A1W2PNR3 127 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 HTR3EA5X5Y0 456 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 H0Y3Z8 333 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 H0YHG0 523 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 H3BNX3 289 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 OR2T1O43869 369 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 NPIPB7O75200 414 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 PRB1P04280 392 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 FUT4P22083 530 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 IDUAP35475 653 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 LIMS1P48059 325 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 SUCLG1P53597 346 aaKnown RBP14.19□□□□□ -0.14
USP40-206ENST00000443711 EGR4Q05215 589 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 ATP6AP1Q15904 470 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 GXYLT1Q4G148 440 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 HBMQ6B0K9 141 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 PODNL1Q6PEZ8 512 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 ZNF730Q6ZMV8 503 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 P3H2Q8IVL5 708 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 ZNF843Q8N446 348 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 OR2V1Q8NHB1 315 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 FAM57AQ8TBR7 257 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 SLC7A13Q8TCU3 470 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 LRTOMTQ8WZ04 291 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 OSTF1Q92882 214 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 RELTQ969Z4 430 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 KTI12Q96EK9 354 aaPredicted RBP14.19□□□□□ -0.14
USP40-206ENST00000443711 ARL5BQ96KC2 179 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 BDH2Q9BUT1 245 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 KLHL4Q9C0H6 718 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 PRDM14Q9GZV8 571 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 TIGARQ9NQ88 270 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 PAQR5Q9NXK6 330 aaPredicted RBP14.19□□□□□ -0.14
USP40-206ENST00000443711 TRAPPC4Q9Y296 219 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 SAMHD1Q9Y3Z3 626 aaKnown RBP14.19□□□□□ -0.14
USP40-206ENST00000443711 LYVE1Q9Y5Y7 322 aa14.19□□□□□ -0.14
USP40-206ENST00000443711 RP1L1Q8IWN7 2480 aaPredicted RBP14.18□□□□□ -0.14
USP40-206ENST00000443711 TRBV4-1A0A0J9YWV2 114 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 SH3PXD2BA1X283 911 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 AHRRA9YTQ3 701 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 SULT2B1O00204 365 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 TNFSF11O14788 317 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 ZNHIT1O43257 154 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 TPOP07202 933 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 PTNP21246 168 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 RPS5P46782 204 aaKnown RBP14.18□□□□□ -0.14
USP40-206ENST00000443711 UGT2B15P54855 530 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 CLDN15P56746 228 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 CARD18P57730 90 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 CSNK2A1P68400 391 aaPredicted RBP14.18□□□□□ -0.14
USP40-206ENST00000443711 MYBPHQ13203 477 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 SF3B4Q15427 424 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP40-206ENST00000443711 EXOC3L2Q2M3D2 409 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 CTU2Q2VPK5 515 aaKnown RBP14.18□□□□□ -0.14
USP40-206ENST00000443711 C1QL3Q5VWW1 255 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 TBPL2Q6SJ96 375 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 TMPPEQ6ZT21 453 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 MBOAT2Q6ZWT7 520 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 CDK20Q8IZL9 346 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 LINC00471Q8N535 108 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 OR4C15Q8NGM1 316 aa14.18□□□□□ -0.14
USP40-206ENST00000443711 OR5M9Q8NGP3 310 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms