RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 UBTFL6P0CB48 400 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-208ENST00000443046 TFPIP10646 304 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 DAOP14920 347 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 DDX5P17844 614 aaKnown RBP12.5□□□□□ -0.41
HMGN1-208ENST00000443046 GPR68Q15743 365 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 MAPK14Q16539 360 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 C3orf36Q3SXR2 165 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 HIKESHIQ53FT3 197 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 UGT2A3Q6UWM9 527 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 EIF3MQ7L2H7 374 aaKnown RBP12.5□□□□□ -0.41
HMGN1-208ENST00000443046 GRINAQ7Z429 371 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 SPATA19Q7Z5L4 167 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 ZIC4Q8N9L1 334 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 NEU4Q8WWR8 484 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-208ENST00000443046 MOAP1Q96BY2 351 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 COQ8BQ96D53 544 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 OR11A1Q9GZK7 315 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 ZNF350Q9GZX5 532 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 OXSMQ9NWU1 459 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 TMEM181Q9P2C4 612 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 CRNNQ9UBG3 495 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-208ENST00000443046 FBXO9Q9UK97 447 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-208ENST00000443046 DNAJC15Q9Y5T4 150 aa12.5□□□□□ -0.41
HMGN1-208ENST00000443046 PRKDCP78527 4128 aaKnown RBP12.5□□□□□ -0.41
HMGN1-208ENST00000443046 KLF11O14901 512 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 EIF1BO60739 113 aaKnown RBP12.49□□□□□ -0.41
HMGN1-208ENST00000443046 STX11O75558 287 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 SNUPNO95149 360 aaKnown RBP12.49□□□□□ -0.41
HMGN1-208ENST00000443046 C6orf47O95873 294 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 AK1P00568 194 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 GUSBP08236 651 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 LINC00032P0C843 101 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 PCMT1P22061 227 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 PAX7P23759 505 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 CASQ1P31415 396 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 RPL3P39023 403 aaKnown RBP12.49□□□□□ -0.41
HMGN1-208ENST00000443046 KHKP50053 298 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 PLAURQ03405 335 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 ARHGAP11BQ3KRB8 267 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 UGT3A2Q3SY77 523 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 CFAP157Q5JU67 520 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 LIPMQ5VYY2 423 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 KANK2Q63ZY3 851 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 ANKRD16Q6P6B7 361 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 EMBQ6PCB8 327 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 NATD1Q8N6N6 113 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 FAM216AQ8WUB2 273 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 OIT3Q8WWZ8 545 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 DNAJA3Q96EY1 480 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 SNX18Q96RF0 628 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 DOK1Q99704 481 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 OCEL1Q9H607 264 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 VWFP04275 2813 aa12.49□□□□□ -0.41
HMGN1-208ENST00000443046 TMEM129A0AVI4 362 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 FAM157AC9JC47 383 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 IGLV1-44P01699 117 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 CRYAAP02489 173 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 IMPDH2P12268 514 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 HPCAL1P37235 193 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 OR2B6P58173 313 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 SLC35A1P78382 337 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 NAAAQ02083 359 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 LGALS3BPQ08380 585 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 TRIP10Q15642 601 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 LSM12Q3MHD2 195 aaKnown RBP12.48□□□□□ -0.41
HMGN1-208ENST00000443046 KLHL24Q6TFL4 600 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 OLIG3Q7RTU3 272 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 ZCCHC24Q8N2G6 241 aaKnown RBP12.48□□□□□ -0.41
HMGN1-208ENST00000443046 C3orf56Q8N813 242 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 POMGNT2Q8NAT1 580 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 NUP37Q8NFH4 326 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 SAP130Q9H0E3 1048 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 METTL17Q9H7H0 456 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-208ENST00000443046 ZNF442Q9H7R0 627 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 MKLN1Q9UL63 735 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 SPEF1Q9Y4P9 236 aa12.48□□□□□ -0.41
HMGN1-208ENST00000443046 ARPC4-TTLL3A0A0A6YYG9 625 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 DUXAA6NLW8 204 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 ZNF208O43345 1280 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 PLIN3O60664 434 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 CECR9P0C854 216 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 CALCRP30988 508 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 ARFIP2P53365 341 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 ETF1P62495 437 aaKnown RBP12.47□□□□□ -0.41
HMGN1-208ENST00000443046 RPS26P62854 115 aaKnown RBP12.47□□□□□ -0.41
HMGN1-208ENST00000443046 HBA1P69905 142 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 HGFACQ04756 655 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 PTGR1Q14914 329 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 TBRG1Q3YBR2 411 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 SPDYE7PQ495Y7 208 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 GALNTL6Q49A17 601 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 PAQR6Q6TCH4 344 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 RINLQ6ZS11 566 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 USP43Q70EL4 1123 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 RIMKLAQ8IXN7 391 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 FAM169BQ8N8A8 192 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 OR4F15Q8NGB8 312 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 OR1K1Q8NGR3 316 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 OR5AK3PQ8NH89 298 aa12.47□□□□□ -0.41
HMGN1-208ENST00000443046 ZNF563Q8TA94 476 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms