RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 MORN4Q8NDC4 146 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 ZNF248Q8NDW4 579 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 SCARB1Q8WTV0 552 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 RHOVQ96L33 236 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 CD180Q99467 661 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 NKX3-1Q99801 234 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-209ENST00000439886 YIPF1Q9Y548 306 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 CACNA1IQ9P0X4 2223 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 ABHD14A-ACY1A0A1B0GW23 586 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 A6NCN8 305 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 CDC123O75794 336 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-209ENST00000439886 FBXO45P0C2W1 286 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 MAT2AP31153 395 aaKnown RBP10.85□□□□□ -0.67
SMPD4-209ENST00000439886 SNRPEP62304 92 aaKnown RBP10.85□□□□□ -0.67
SMPD4-209ENST00000439886 OR2B11Q5JQS5 317 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 AADACL4Q5VUY2 407 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 CD200R1LQ6Q8B3 271 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 LINC00471Q8N535 108 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 EDARADDQ8WWZ3 215 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 SLC41A3Q96GZ6 507 aa10.85□□□□□ -0.67
SMPD4-209ENST00000439886 TDRD15B5MCY1 1934 aaKnown RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 LOC390937A0A1W2PQ73 354 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 ERI3O43414 337 aaKnown RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 TGM6O95932 706 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 IFNA4P05014 189 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 AP3S2P59780 193 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 GABREP78334 506 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 TNFRSF17Q02223 184 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 ID2Q02363 134 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 SMCO1Q147U7 214 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 RPE65Q16518 533 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 ARHGAP11AQ6P4F7 1023 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 HTR3DQ70Z44 454 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 MEPCEQ7L2J0 689 aaKnown RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 OR4N5Q8IXE1 308 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 BVESQ8NE79 360 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 OR51Q1Q8NH59 317 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 SMPDL3BQ92485 455 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 CAMK1GQ96NX5 476 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 ENKD1Q9H0I2 346 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 AUP1Q9Y679 476 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 ZSWIM8A7E2V4 1837 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 ASCC3Q8N3C0 2202 aaKnown RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 KDM4EB2RXH2 506 aaPredicted RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 CDC42EP2O14613 210 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 SUSD5O60279 629 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 PPP1R3DO95685 299 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 EOMESO95936 686 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 PRF1P14222 555 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 CCND3P30281 292 aaPredicted RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 RPL4P36578 427 aaKnown RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 MC3RP41968 323 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 EPHB3P54753 998 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 GAS1P54826 345 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 SPCS3P61009 180 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 RAP2BP61225 183 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 AGERQ15109 404 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 NHLRC3Q5JS37 347 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 RAB12Q6IQ22 244 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 RGS7BPQ6MZT1 257 aaPredicted RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 SVIPQ8NHG7 77 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 SUN3Q8TAQ9 357 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 DVL3Q92997 716 aaPredicted RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 SEC22AQ96IW7 307 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 ASF1BQ9NVP2 202 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 VSX1Q9NZR4 365 aaPredicted RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 AKAP7Q9P0M2 348 aaPredicted RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 KLHL9Q9P2J3 617 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 MYEF2Q9P2K5 600 aaKnown RBP10.84□□□□□ -0.67
SMPD4-209ENST00000439886 OR51B4Q9Y5P0 310 aa10.84□□□□□ -0.67
SMPD4-209ENST00000439886 DNASE2O00115 360 aaPredicted RBP10.83□□□□□ -0.67
SMPD4-209ENST00000439886 LATO43561 262 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 HMGA1P17096 107 aaKnown RBP10.83□□□□□ -0.67
SMPD4-209ENST00000439886 ITGB8P26012 769 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 TEAD1P28347 426 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 GNALP38405 381 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 PCGF3Q3KNV8 242 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 KDF1Q8NAX2 398 aaPredicted RBP10.83□□□□□ -0.67
SMPD4-209ENST00000439886 POGLUT1Q8NBL1 392 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 OR11G2Q8NGC1 345 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 OR13C2Q8NGS9 318 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 OR4K13Q8NH42 304 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 PFN4Q8NHR9 129 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 PHOSPHO1Q8TCT1 267 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 DUSP19Q8WTR2 217 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 HGDQ93099 445 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 DNAJA3Q96EY1 480 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 S100A16Q96FQ6 103 aaKnown RBP10.83□□□□□ -0.67
SMPD4-209ENST00000439886 EXO5Q9H790 373 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 TREM1Q9NP99 234 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 ISYNA1Q9NPH2 558 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 NDRG3Q9UGV2 375 aa10.83□□□□□ -0.67
SMPD4-209ENST00000439886 A0A1W2PRU2 124 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 NDUFS4O43181 175 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 ARL6IP5O75915 188 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 GALTP07902 379 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 LAMP2P13473 410 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 PPP3CBP16298 524 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 PDE7AQ13946 482 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 CRMP1Q14194 572 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms