RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 AKR1E2Q96JD6 320 aa2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 KIR2DL4Q99706 377 aa2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 ZNF416Q9BWM5 594 aa2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 TM2D1Q9BX74 207 aa2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 GLT8D2Q9H1C3 349 aa2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 DPH5Q9H2P9 285 aa2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 SLC35D1Q9NTN3 355 aa2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 TRMT112Q9UI30 125 aaKnown RBP2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 ABCG2Q9UNQ0 655 aa2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 SAMD4AQ9UPU9 718 aaKnown RBP2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 MYO5AQ9Y4I1 1855 aaKnown RBP2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 CFAP54Q96N23 3096 aa2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 ARID1AO14497 2285 aa2.02□□□□□ -2.09
HMGB1P31-201ENST00000437242 CACNA1AO00555 2505 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 TRANK1O15050 2925 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 DMDP11532 3685 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 MED23Q9ULK4 1368 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 PARP14Q460N5 1801 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 C5orf42Q9H799 3197 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 SH3TC1Q8TE82 1336 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 MYO15AQ9UKN7 3530 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 A0A1W2PNV4 684 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 GSAPA4D1B5 854 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 EPOPA6NHQ4 379 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 B4DXG7 233 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 K7EPI3 171 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 SDHDO14521 159 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 CASKO14936 926 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 CTAGE5O15320 804 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 DUX1O43812 170 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 CSF2P04141 144 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 HBQ1P09105 142 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 CLUP10909 449 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 GCFC2P16383 781 aaKnown RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 IDSP22304 550 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 ATP5A1P25705 553 aaKnown RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 GNPDA1P46926 289 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 EFNA3P52797 238 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 RPS8P62241 208 aaKnown RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 RPL32P62910 135 aaKnown RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 RPL8P62917 257 aaKnown RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 OC90Q02509 493 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 RIPPLY1Q0D2K3 151 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 OVGP1Q12889 678 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 DPYSL3Q14195 570 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 KCNJ11Q14654 390 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 ATXN7L3Q14CW9 347 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 PRR4Q16378 134 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 TATDN3Q17R31 274 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 ISXQ2M1V0 245 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 SBK1Q52WX2 424 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 PAGE2BQ5JRK9 111 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 ZNF57Q68EA5 555 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 OR8G2PQ6IF36 304 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 UFSP1Q6NVU6 142 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 SERPINA9Q86WD7 417 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 TMEM17Q86X19 198 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 APOBEC3FQ8IUX4 373 aaKnown RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 MCOLN2Q8IZK6 566 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 CSNK1A1LQ8N752 337 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 ZBTB44Q8NCP5 570 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 OR13F1Q8NGS4 319 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 OR10T2Q8NGX3 314 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 RAET1EQ8TD07 263 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 FAF2Q96CS3 445 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 CASD1Q96PB1 797 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 TMEM121Q9BTD3 319 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 POLR3FQ9H1D9 316 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 RIBC2Q9H4K1 309 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 TDRD3Q9H7E2 651 aaKnown RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 COQ10BQ9H8M1 238 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 LIN28AQ9H9Z2 209 aaKnown RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 MIEF1Q9NQG6 463 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 PNO1Q9NRX1 252 aaKnown RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 FARSBQ9NSD9 589 aaKnown RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 APOBEC3BQ9UH17 382 aaKnown RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 L3MBTL1Q9Y468 752 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 FLVCR1Q9Y5Y0 555 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 MUC6Q6W4X9 2439 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 KMT2BQ9UMN6 2715 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 MYH2Q9UKX2 1941 aa2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 COL11A1P12107 1806 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P31-201ENST00000437242 TRIOO75962 3097 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 SF3B1O75533 1304 aaKnown RBP eCLIP2□□□□□ -2.09
HMGB1P31-201ENST00000437242 IGLV8-61A0A075B6I0 122 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 ZSCAN5BA6NJL1 495 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 E9PLD3 99 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 NDC80O14777 642 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 IFNB1P01574 187 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 STSP08842 583 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 SLC35E2P0CK97 266 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 NCF1P14598 390 aaPredicted RBP2□□□□□ -2.09
HMGB1P31-201ENST00000437242 XRCC1P18887 633 aaPredicted RBP2□□□□□ -2.09
HMGB1P31-201ENST00000437242 TBXA2RP21731 343 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 RIPPLY3P57055 190 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 VLDLRP98155 873 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 ZNF154Q13106 437 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 KIAA0040Q15053 153 aa2□□□□□ -2.09
HMGB1P31-201ENST00000437242 TPD52L1Q16890 204 aaPredicted RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms