RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 MARCOQ9UEW3 520 aaPredicted RBP6.85□□□□□ -1.31
VPS50-203ENST00000436177 LGALS13Q9UHV8 139 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 ZDHHC2Q9UIJ5 367 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 SLC9A8Q9Y2E8 581 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 HDGFL3Q9Y3E1 203 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 CADP27708 2225 aa6.85□□□□□ -1.31
VPS50-203ENST00000436177 NBEAL1Q6ZS30 2694 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 PLCE1Q9P212 2302 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 IGKV3D-15A0A087WSY6 115 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 PRSS51A0A1B0GVH4 220 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 SHISA9B4DS77 424 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 CD5LO43866 347 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 FCMRO60667 390 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 EIF1BO60739 113 aaKnown RBP6.84□□□□□ -1.31
VPS50-203ENST00000436177 UGT2B17O75795 530 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 KRT33AO76009 404 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 SNUPNO95149 360 aaKnown RBP6.84□□□□□ -1.31
VPS50-203ENST00000436177 PMS2P2O95744 297 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 BPGMP07738 259 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 OR12D1P0DN82 309 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 CCNA2P20248 432 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 PTNP21246 168 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 UQCRC2P22695 453 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 S100A3P33764 101 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 CLK1P49759 484 aaKnown RBP6.84□□□□□ -1.31
VPS50-203ENST00000436177 CASP9P55211 416 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 PDK3Q15120 406 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 CHI3L2Q15782 390 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 KRT71Q3SY84 523 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 ABHD12BQ7Z5M8 362 aaPredicted RBP6.84□□□□□ -1.31
VPS50-203ENST00000436177 CMIPQ8IY22 773 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 CLEC4FQ8N1N0 589 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 MUC15Q8N387 334 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 ZNF433Q8N7K0 673 aaPredicted RBP6.84□□□□□ -1.31
VPS50-203ENST00000436177 MIPOL1Q8TD10 442 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 TMEM158Q8WZ71 300 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 PMM1Q92871 262 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 RAB8BQ92930 207 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 ROPN1LQ96C74 230 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 ZBTB18Q99592 522 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 DHRS9Q9BPW9 319 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 SLC35A5Q9BS91 424 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 NAA11Q9BSU3 229 aaPredicted RBP6.84□□□□□ -1.31
VPS50-203ENST00000436177 ROPN1BQ9BZX4 212 aaPredicted RBP6.84□□□□□ -1.31
VPS50-203ENST00000436177 ROPN1Q9HAT0 212 aaPredicted RBP6.84□□□□□ -1.31
VPS50-203ENST00000436177 EXOSC3Q9NQT5 275 aaKnown RBP6.84□□□□□ -1.31
VPS50-203ENST00000436177 CTPS2Q9NRF8 586 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 CBLN4Q9NTU7 201 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 MALT1Q9UDY8 824 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 CDC42EP3Q9UKI2 254 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 ATP23Q9Y6H3 246 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 VPS13CQ709C8 3753 aa6.84□□□□□ -1.31
VPS50-203ENST00000436177 TMED7-TICAM2A0A0A6YYA0 188 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 CENPVL1A0A0U1RR11 272 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 SCO2A0A1W2PP80 73 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 FAM234BA2RU67 622 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 WDR91A4D1P6 747 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 E9PBE3 544 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 RGS16O15492 202 aaPredicted RBP6.83□□□□□ -1.32
VPS50-203ENST00000436177 NDUFS7O75251 213 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 PGM3O95394 542 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 WNT11O96014 354 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 CSF3P09919 207 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 NR2F1P10589 423 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 SLC25A16P16260 332 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 CD40P25942 277 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 TTKP33981 857 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 IDH2P48735 452 aaKnown RBP6.83□□□□□ -1.32
VPS50-203ENST00000436177 POLR2HP52434 150 aaKnown RBP6.83□□□□□ -1.32
VPS50-203ENST00000436177 SLC16A1P53985 500 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 COPZ1P61923 177 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 SLC35A1P78382 337 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 TXNL4AP83876 142 aaKnown RBP6.83□□□□□ -1.32
VPS50-203ENST00000436177 KRTAP1-1Q07627 177 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 FAM174BQ3ZCQ3 159 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 C9orf135Q5VTT2 229 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 ZNF544Q6NX49 715 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 EMBQ6PCB8 327 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 SEZ6L2Q6UXD5 910 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 OLIG3Q7RTU3 272 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 HMGN2P46Q86SG4 172 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 ZNF440Q8IYI8 595 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 C17orf78Q8N4C9 275 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 C1orf162Q8NEQ5 155 aaPredicted RBP6.83□□□□□ -1.32
VPS50-203ENST00000436177 OR8J2Q8NGG1 315 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 FAM168AQ92567 244 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 TESCQ96BS2 214 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 NEURL3Q96EH8 262 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 DNAJA3Q96EY1 480 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 PKNOX2Q96KN3 472 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 PANX1Q96RD7 426 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 CCDC106Q9BWC9 280 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 AMBRA1Q9C0C7 1298 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 OR11A1Q9GZK7 315 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 CENPHQ9H3R5 247 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 SERHL2Q9H4I8 314 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 AKTIPQ9H8T0 292 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 NPAP1Q9NZP6 1156 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 TMEM181Q9P2C4 612 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 ING1Q9UK53 422 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms