RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 HLA-DPB1P04440 258 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 ZNF3P17036 446 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 HK1P19367 917 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 APEX1P27695 318 aaKnown RBP13.42□□□□□ -0.26
RFTN1-203ENST00000432519 NAA10P41227 235 aaPredicted RBP13.42□□□□□ -0.26
RFTN1-203ENST00000432519 SLC3A1Q07837 685 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 SELENBP1Q13228 472 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.42□□□□□ -0.26
RFTN1-203ENST00000432519 OR5W2Q8NH69 310 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 SGTBQ96EQ0 304 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 CCDC32Q9BV29 185 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 CACNA1CQ13936 2221 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 FABP12A6NFH5 140 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 FAM171A2A8MVW0 826 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 IGKV3-11P04433 115 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 GUSBP08236 651 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 CSF3P09919 207 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 SHC1P29353 583 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 SLC6A6P31641 620 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 EIF2B2P49770 351 aaKnown RBP13.41□□□□□ -0.26
RFTN1-203ENST00000432519 TPTEP56180 551 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 ERVK-25P63136 954 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 HSD11B2P80365 405 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 SKP2Q13309 424 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 DTX3Q8N9I9 347 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 FAM98AQ8NCA5 519 aaKnown RBP13.41□□□□□ -0.26
RFTN1-203ENST00000432519 SLC2A12Q8TD20 617 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 ZNF721Q8TF20 911 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 NUDT9Q9BW91 350 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 ERVMER34-1Q9H9K5 563 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 ASB6Q9NWX5 421 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 SERTAD3Q9UJW9 196 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 OR6C68A6NDL8 312 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 EFCAB7A8K855 629 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 EGR4Q05215 589 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 TP53I3Q53FA7 332 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 FAM71CQ8NEG0 241 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 TSSK2Q96PF2 358 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 MKKSQ9NPJ1 570 aaPredicted RBP13.41□□□□□ -0.26
RFTN1-203ENST00000432519 FSCN3Q9NQT6 498 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 INIPQ9NRY2 104 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 ICAM5Q9UMF0 924 aa13.41□□□□□ -0.26
RFTN1-203ENST00000432519 SNPHO15079 494 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 ICOSLGO75144 302 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 NDUFB2O95178 105 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 UTS2O95399 124 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 OR10A3P58181 314 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 LTBQ06643 244 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 SERTAD2Q14140 314 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 TOMM34Q15785 309 aaPredicted RBP13.4□□□□□ -0.26
RFTN1-203ENST00000432519 DDI2Q5TDH0 399 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 IL20RBQ6UXL0 311 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 LANCL3Q6ZV70 420 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 UTS2BQ765I0 119 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 C9orf40Q8IXQ3 194 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 ADAMTS18Q8TE60 1221 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 ADIPOR1Q96A54 375 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 RAB33BQ9H082 229 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 MRPS17Q9Y2R5 130 aaKnown RBP13.4□□□□□ -0.26
RFTN1-203ENST00000432519 A0A087WV48 116 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 A0A1W2PPK0 400 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 K7ESF4 209 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 BCAT2O15382 392 aaPredicted RBP13.4□□□□□ -0.26
RFTN1-203ENST00000432519 PYCR1P32322 319 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 RPL4P36578 427 aaKnown RBP13.4□□□□□ -0.26
RFTN1-203ENST00000432519 AQP2P41181 271 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 COPZ1P61923 177 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 SHBQ15464 509 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 SYT9Q86SS6 491 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 FAM181AQ8N9Y4 354 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 NPEPL1Q8NDH3 523 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 IL17RDQ8NFM7 739 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 HLA-CQ95604 372 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 PGLYRP3Q96LB9 341 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 CTSFQ9UBX1 484 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 PRODH2Q9UF12 536 aa13.4□□□□□ -0.26
RFTN1-203ENST00000432519 BLACEA4D250 179 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 BLOC1S5-TXNDC5H3BN57 136 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 PSMD9O00233 223 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 POLR1CO15160 346 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-203ENST00000432519 TMCC2O75069 709 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 SOX30O94993 753 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 DAB2P98082 770 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 ARHGAP11AQ6P4F7 1023 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 CNIH2Q6PI25 160 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 C16orf47Q6ZP98 133 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-203ENST00000432519 Q7L0L9 218 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 VASH1Q7L8A9 365 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-203ENST00000432519 SPEM1Q8N4L4 309 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 ZNF578Q96N58 590 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-203ENST00000432519 DDOQ99489 341 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 UBQLN4Q9NRR5 601 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 ATXN7L1Q9ULK2 861 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-203ENST00000432519 COPS3Q9UNS2 423 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 IGHV3-20A0A0C4DH32 117 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 A0A1B0GVC2 190 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 A6NIN4 97 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 IDSB3KWA1 339 aa13.39□□□□□ -0.27
RFTN1-203ENST00000432519 NUDT21O43809 227 aaKnown RBP13.39□□□□□ -0.27
RFTN1-203ENST00000432519 SELENOFO60613 162 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms