RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PNPT1Q8TCS8 783 aaKnown RBP13.66□□□□□ -0.22
SEC13-210ENST00000428626 GTPBP3Q969Y2 492 aaKnown RBP13.66□□□□□ -0.22
SEC13-210ENST00000428626 APH1AQ96BI3 265 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 TRMT61AQ96FX7 289 aaKnown RBP13.66□□□□□ -0.22
SEC13-210ENST00000428626 REG4Q9BYZ8 158 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 WDR55Q9H6Y2 383 aaPredicted RBP13.66□□□□□ -0.22
SEC13-210ENST00000428626 NOSIPQ9Y314 301 aaKnown RBP13.66□□□□□ -0.22
SEC13-210ENST00000428626 HDGFL3Q9Y3E1 203 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 GPR45Q9Y5Y3 372 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 SLC25A15Q9Y619 301 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 HEATR1Q9H583 2144 aaKnown RBP13.66□□□□□ -0.22
SEC13-210ENST00000428626 TMED7-TICAM2A0A0A6YYA0 188 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 E7EQL1 145 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 PGRP06401 933 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 EPHA3P29320 983 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 IDUAP35475 653 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 MVDP53602 400 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 CDH11P55287 796 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 OR2B6P58173 313 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 PPP2R2BQ00005 443 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 SLC25A3Q00325 362 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 C11orf71Q6IPW1 123 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 UBE2J2Q8N2K1 259 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 MUCL1Q96DR8 90 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 TRNT1Q96Q11 434 aaKnown RBP13.65□□□□□ -0.22
SEC13-210ENST00000428626 CENPHQ9H3R5 247 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 KCNK9Q9NPC2 374 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 RLIMQ9NVW2 624 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 EMC3Q9P0I2 261 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 TMEM181Q9P2C4 612 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 MALT1Q9UDY8 824 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 B3GALT5Q9Y2C3 310 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 TMED7Q9Y3B3 224 aa13.65□□□□□ -0.22
SEC13-210ENST00000428626 CRLF1O75462 422 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 TACR3P29371 465 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 ZNF83P51522 516 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 IRX1P78414 480 aaPredicted RBP13.64□□□□□ -0.23
SEC13-210ENST00000428626 GABRA6Q16445 453 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 MRPL2Q5T653 305 aaKnown RBP13.64□□□□□ -0.23
SEC13-210ENST00000428626 C9orf135Q5VTT2 229 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 LRRC74BQ6ZQY2 392 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 ZNF621Q6ZSS3 439 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 P2RY8Q86VZ1 359 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 WDR31Q8NA23 367 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 PIGXQ8TBF5 258 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 MUS81Q96NY9 551 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 OR52E6Q96RD3 313 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 PANX1Q96RD7 426 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 C1QTNF6Q9BXI9 259 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 GRIP2Q9C0E4 1043 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 RAB21Q9UL25 225 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 TRAPPC4Q9Y296 219 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 FLVCR1Q9Y5Y0 555 aa13.64□□□□□ -0.23
SEC13-210ENST00000428626 SPIN1Q9Y657 262 aaPredicted RBP13.64□□□□□ -0.23
SEC13-210ENST00000428626 A0A096LNT2 108 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 CIB4A0PJX0 185 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 CCT8L1PA6NM43 557 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 DNPH1O43598 174 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 SNNO75324 88 aaPredicted RBP13.63□□□□□ -0.23
SEC13-210ENST00000428626 MRPL33O75394 65 aaKnown RBP13.63□□□□□ -0.23
SEC13-210ENST00000428626 SNUPNO95149 360 aaKnown RBP13.63□□□□□ -0.23
SEC13-210ENST00000428626 CD40P25942 277 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 CLK1P49759 484 aaKnown RBP13.63□□□□□ -0.23
SEC13-210ENST00000428626 HPCAP84074 193 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 EPS8Q12929 822 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 SLC17A1Q14916 467 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 ETFDHQ16134 617 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 GTDC1Q4AE62 458 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 TSPO2Q5TGU0 170 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 MAVSQ7Z434 540 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 PIAS4Q8N2W9 510 aaPredicted RBP13.63□□□□□ -0.23
SEC13-210ENST00000428626 ANKRD42Q8N9B4 389 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 ZIC4Q8N9L1 334 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 WDR60Q8WVS4 1066 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 HTRA1Q92743 480 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 ZHX1-C8orf76Q96EF9 292 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 PAIP2Q9BPZ3 127 aaKnown RBP13.63□□□□□ -0.23
SEC13-210ENST00000428626 AMBRA1Q9C0C7 1298 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 ADAM19Q9H013 955 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 SLC7A10Q9NS82 523 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 ASB6Q9NWX5 421 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 TAS2R16Q9NYV7 291 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 CHST2Q9Y4C5 530 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 YLPM1P49750 1951 aaKnown RBP13.63□□□□□ -0.23
SEC13-210ENST00000428626 STAB1Q9NY15 2570 aa13.63□□□□□ -0.23
SEC13-210ENST00000428626 MXRA5Q9NR99 2828 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 IGHV4-30-2A0A087WSY4 118 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 FAAHO00519 579 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 GPR171O14626 319 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 ZNF208O43345 1280 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 GKN3PP0CG01 181 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 TTKP33981 857 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 ACAA2P42765 397 aaKnown RBP13.62□□□□□ -0.23
SEC13-210ENST00000428626 SLC1A3P43003 542 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 POLR2HP52434 150 aaKnown RBP13.62□□□□□ -0.23
SEC13-210ENST00000428626 CASP12Q6UXS9 341 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 ZNF836Q6ZNA1 936 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 SPATA19Q7Z5L4 167 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 VRK2Q86Y07 508 aa13.62□□□□□ -0.23
SEC13-210ENST00000428626 CMIPQ8IY22 773 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms