RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 PGM3O95394 542 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 ADAP00813 363 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 DNASE1P24855 282 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 OR3A2P47893 321 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 CSNK2A1P68400 391 aaPredicted RBP16.98■□□□□ 0.31
COL9A2-204ENST00000427563 H3F3AP84243 136 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 GNA13Q14344 377 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 CGB2Q6NT52 195 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 SEZ6L2Q6UXD5 910 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 STK32CQ86UX6 486 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 NFKBIDQ8NI38 313 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 CPPED1Q9BRF8 314 aaPredicted RBP16.98■□□□□ 0.31
COL9A2-204ENST00000427563 SPATA9Q9BWV2 254 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 TMEM45AQ9NWC5 275 aa16.98■□□□□ 0.31
COL9A2-204ENST00000427563 THUMPD1Q9NXG2 353 aaKnown RBP16.98■□□□□ 0.31
COL9A2-204ENST00000427563 SPIN1Q9Y657 262 aaPredicted RBP16.98■□□□□ 0.31
COL9A2-204ENST00000427563 MAP1AP78559 2803 aaPredicted RBP16.98■□□□□ 0.31
COL9A2-204ENST00000427563 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.97■□□□□ 0.31
COL9A2-204ENST00000427563 PLAUP00749 431 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 HTR3AP46098 478 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 CLK1P49759 484 aaKnown RBP16.97■□□□□ 0.31
COL9A2-204ENST00000427563 HOXC5Q00444 222 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 BNIP2Q12982 314 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 PDK3Q15120 406 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 ADRM1Q16186 407 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 SFRP5Q5T4F7 317 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 PRAMEF8Q5VWM4 474 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 PRAMEF7Q5VXH5 474 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 KRTAP1-3Q8IUG1 177 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 ZNF440Q8IYI8 595 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 S100PBPQ96BU1 408 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 SIKE1Q9BRV8 207 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 TACO1Q9BSH4 297 aaKnown RBP16.97■□□□□ 0.31
COL9A2-204ENST00000427563 OR10A4Q9H209 315 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 TMEM181Q9P2C4 612 aa16.97■□□□□ 0.31
COL9A2-204ENST00000427563 DSCAMO60469 2012 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 TROVE2P10155 538 aaKnown RBP eCLIP16.96■□□□□ 0.31
COL9A2-204ENST00000427563 PPP3CBP16298 524 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 GPX2P18283 190 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 NCF2P19878 526 aaPredicted RBP16.96■□□□□ 0.31
COL9A2-204ENST00000427563 SLC16A1P53985 500 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 SEC24CP53992 1094 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 OR2B6P58173 313 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 IRX1P78414 480 aaPredicted RBP16.96■□□□□ 0.31
COL9A2-204ENST00000427563 SELPLGQ14242 412 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 DEFB113Q30KQ7 82 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 GLIPR1L2Q4G1C9 344 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 RUNDC3AQ59EK9 446 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 ZNF311Q5JNZ3 666 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 GCNT6Q5T4J0 391 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 ATG4DQ86TL0 474 aaPredicted RBP16.96■□□□□ 0.31
COL9A2-204ENST00000427563 BBS10Q8TAM1 723 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 C3orf49Q96BT1 292 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 ALPK1Q96QP1 1244 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 RAD21L1Q9H4I0 556 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 TRAPPC4Q9Y296 219 aa16.96■□□□□ 0.31
COL9A2-204ENST00000427563 DNPH1O43598 174 aa16.95■□□□□ 0.3
COL9A2-204ENST00000427563 TPST1O60507 370 aa16.95■□□□□ 0.3
COL9A2-204ENST00000427563 FPR1P21462 350 aa16.95■□□□□ 0.3
COL9A2-204ENST00000427563 IGHV1-2P23083 117 aa16.95■□□□□ 0.3
COL9A2-204ENST00000427563 FKBP2P26885 142 aaKnown RBP16.95■□□□□ 0.3
COL9A2-204ENST00000427563 KEAP1Q14145 624 aa16.95■□□□□ 0.3
COL9A2-204ENST00000427563 LARS2Q15031 903 aaKnown RBP16.95■□□□□ 0.3
COL9A2-204ENST00000427563 Q6ZT83 130 aa16.95■□□□□ 0.3
COL9A2-204ENST00000427563 WFDC8Q8IUA0 241 aa16.95■□□□□ 0.3
COL9A2-204ENST00000427563 CADM2Q8N3J6 435 aa16.95■□□□□ 0.3
COL9A2-204ENST00000427563 DDIT4LQ96D03 193 aa16.95■□□□□ 0.3
COL9A2-204ENST00000427563 WFDC6Q9BQY6 131 aa16.95■□□□□ 0.3
COL9A2-204ENST00000427563 IFT52Q9Y366 437 aa16.95■□□□□ 0.3
COL9A2-204ENST00000427563 A0A0G2JND7 137 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 TMEM229AB2RXF0 380 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 NPIPB7O75200 414 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 HTR2AP28223 471 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 P2RY4P51582 365 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 FOXG1P55316 489 aaPredicted RBP16.94■□□□□ 0.3
COL9A2-204ENST00000427563 CDK6Q00534 326 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 TAB1Q15750 504 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 BEX5Q5H9J7 111 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 WBP2NLQ6ICG8 309 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 GALNT5Q7Z7M9 940 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 PTOV1Q86YD1 416 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 DPP10Q8N608 796 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 STEAP2Q8NFT2 490 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 TMEM204Q9BSN7 226 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 TMUB1Q9BVT8 246 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 TMEM120AQ9BXJ8 343 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 POTEKPQ9BYX7 375 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 LEF1Q9UJU2 399 aaPredicted RBP16.94■□□□□ 0.3
COL9A2-204ENST00000427563 ZNF232Q9UNY5 417 aa16.94■□□□□ 0.3
COL9A2-204ENST00000427563 GMNCA6NCL1 334 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 TMEM247A6NEH6 219 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 LIPT2A6NK58 231 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 FBP2O00757 339 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 LYZL6O75951 148 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 IGHV3-9P01782 118 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 ETS2P15036 469 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 COX5AP20674 150 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 DRD4P21917 467 aa16.93■□□□□ 0.3
COL9A2-204ENST00000427563 PPIBP23284 216 aaKnown RBP16.93■□□□□ 0.3
COL9A2-204ENST00000427563 SF3A3Q12874 501 aaKnown RBP eCLIP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms