RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 MEIOBQ8N635 442 aa13.88□□□□□ -0.19
COL11A1-204ENST00000427239 ATP6V1C2Q8NEY4 427 aa13.88□□□□□ -0.19
COL11A1-204ENST00000427239 OR52J3Q8NH60 311 aa13.88□□□□□ -0.19
COL11A1-204ENST00000427239 TMEM255BQ8WV15 326 aa13.88□□□□□ -0.19
COL11A1-204ENST00000427239 BBC3Q96PG8 261 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-204ENST00000427239 ALPK1Q96QP1 1244 aa13.88□□□□□ -0.19
COL11A1-204ENST00000427239 PAQR5Q9NXK6 330 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-204ENST00000427239 SPRR3Q9UBC9 169 aa13.88□□□□□ -0.19
COL11A1-204ENST00000427239 TRAPPC4Q9Y296 219 aa13.88□□□□□ -0.19
COL11A1-204ENST00000427239 SAMHD1Q9Y3Z3 626 aaKnown RBP13.88□□□□□ -0.19
COL11A1-204ENST00000427239 LYVE1Q9Y5Y7 322 aa13.88□□□□□ -0.19
COL11A1-204ENST00000427239 CHD6Q8TD26 2715 aa13.88□□□□□ -0.19
COL11A1-204ENST00000427239 A0A087WUU8 490 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 TFPIP10646 304 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 SFTPDP35247 375 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 PTGS2P35354 604 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 LIMS1P48059 325 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 ARHGDIAP52565 204 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 CLDN18P56856 261 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 EGR4Q05215 589 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 FOXD4Q12950 439 aaPredicted RBP13.87□□□□□ -0.19
COL11A1-204ENST00000427239 WLSQ5T9L3 541 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 C1orf140Q5VVS0 124 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 FBXW10Q5XX13 1052 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 ZNF730Q6ZMV8 503 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 LRTOMTQ8WZ04 291 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 KLHL15Q96M94 604 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 TMEM185BQ9H7F4 350 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 MED31Q9Y3C7 131 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 FREM3P0C091 2139 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 IGKV1D-42A0A075B6H8 117 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 TRAV36DV7A0A075B6V5 113 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 NPIPA2E9PIF3 369 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 NPIPA3F8WFD2 350 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 FUT4P22083 530 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 DNAJA1P31689 397 aaKnown RBP13.87□□□□□ -0.19
COL11A1-204ENST00000427239 CLDN20P56880 219 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 HSF1Q00613 529 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 RBPJQ06330 500 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 PODNL1Q6PEZ8 512 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 GFRALQ6UXV0 394 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 TMPPEQ6ZT21 453 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 MBOAT2Q6ZWT7 520 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 GGNQ86UU5 652 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 CDK20Q8IZL9 346 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 OR6S1Q8NH40 331 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 SMPDL3BQ92485 455 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 CENPNQ96H22 339 aaPredicted RBP13.87□□□□□ -0.19
COL11A1-204ENST00000427239 WDYHV1Q96HA8 205 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 ARL5BQ96KC2 179 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 OR5B2Q96R09 309 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 FUZQ9BT04 418 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 OR11A1Q9GZK7 315 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 PRDM14Q9GZV8 571 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 DCLRE1BQ9H816 532 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 TIGARQ9NQ88 270 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 U3KQV3 271 aa13.87□□□□□ -0.19
COL11A1-204ENST00000427239 ZNF407Q9C0G0 2248 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 A0A0J9YW62 118 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 TRBV4-1A0A0J9YWV2 114 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 SH3PXD2BA1X283 911 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 B8ZZF3 427 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 EIF1AYO14602 144 aaKnown RBP13.86□□□□□ -0.19
COL11A1-204ENST00000427239 E2F6O75461 281 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 OPN1LWP04000 364 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 IFNGR2P38484 337 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 SUCLG1P53597 346 aaKnown RBP13.86□□□□□ -0.19
COL11A1-204ENST00000427239 CARD18P57730 90 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 RPS3AP61247 264 aaKnown RBP13.86□□□□□ -0.19
COL11A1-204ENST00000427239 CSNK2A1P68400 391 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-204ENST00000427239 MYBPHQ13203 477 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 SF3B4Q15427 424 aaKnown RBP eCLIP13.86□□□□□ -0.19
COL11A1-204ENST00000427239 FAM69AQ5T7M9 428 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 CHERPQ8IWX8 916 aaKnown RBP13.86□□□□□ -0.19
COL11A1-204ENST00000427239 UBQLNLQ8IYU4 475 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 ST6GALNAC3Q8NDV1 305 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 MFSD8Q8NHS3 518 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 MIB2Q96AX9 1013 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 KTI12Q96EK9 354 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-204ENST00000427239 NRBF2Q96F24 287 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 NTN4Q9HB63 628 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 KRCC1Q9NPI7 259 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-204ENST00000427239 MEPEQ9NQ76 525 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-204ENST00000427239 TNFRSF10DQ9UBN6 386 aa13.86□□□□□ -0.19
COL11A1-204ENST00000427239 ZC3H12DA2A288 527 aaKnown RBP13.85□□□□□ -0.19
COL11A1-204ENST00000427239 AHRRA9YTQ3 701 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 SULT2B1O00204 365 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 SEC14L5O43304 696 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 AHSA1O95433 338 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 PMS2P2O95744 297 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 IDUAP35475 653 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 DIO1P49895 249 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 CLDN15P56746 228 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 RAC3P60763 192 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 SRYQ05066 204 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 MFSD13AQ14CX5 517 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 MICAQ29983 383 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 EXOC3L2Q2M3D2 409 aa13.85□□□□□ -0.19
COL11A1-204ENST00000427239 CTU2Q2VPK5 515 aaKnown RBP13.85□□□□□ -0.19
COL11A1-204ENST00000427239 GXYLT1Q4G148 440 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms