RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 PAHP00439 452 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 TCEA1P23193 301 aaKnown RBP10.61□□□□□ -0.71
UBR4-207ENST00000425413 ZNF85Q03923 595 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 ZP2Q05996 745 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 GALEQ14376 348 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 AGAP6Q5VW22 663 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 CEACAM19Q7Z692 300 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 ZNF615Q8N8J6 731 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 MOSPD2Q8NHP6 518 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 DNAJA4Q8WW22 397 aaPredicted RBP10.61□□□□□ -0.71
UBR4-207ENST00000425413 AP3S1Q92572 193 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 ORAI1Q96D31 301 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 AGAP4Q96P64 663 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 G6PC3Q9BUM1 346 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 CUTCQ9NTM9 273 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 ASB6Q9NWX5 421 aa10.61□□□□□ -0.71
UBR4-207ENST00000425413 THADAQ6YHU6 1953 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 TLCD2A6NGC4 264 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 POLR1CO15160 346 aaPredicted RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 RGS9O75916 674 aaPredicted RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 MT-ND5P03915 603 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 SLC2A2P11168 524 aaPredicted RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 PSMB10P40306 273 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 GABRA4P48169 554 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 RACK1P63244 317 aaKnown RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 SCN1BQ07699 218 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 RNASE12Q5GAN4 147 aaKnown RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 ZNF517Q6ZMY9 492 aaPredicted RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 ZNF550Q7Z398 422 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 SIX5Q8N196 739 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 PTPMT1Q8WUK0 201 aaPredicted RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 SLC35B4Q969S0 331 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 ZNF486Q96H40 463 aaPredicted RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 WDFY2Q96P53 400 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 DEPDC7Q96QD5 511 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 MESP1Q9BRJ9 268 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 BEX2Q9BXY8 128 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 ISYNA1Q9NPH2 558 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 POLE3Q9NRF9 147 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 ZNF221Q9UK13 617 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 ELOA3DA6NLF2 546 aaPredicted RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 H3BSH0 61 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 H7C1C5 153 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 SELENOFO60613 162 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 NDUFB2O95178 105 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 IFNGP01579 166 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 TFP02787 698 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 F13BP05160 661 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 AQP2P41181 271 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 LCN6P62502 163 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 MRPS15P82914 257 aaKnown RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 SMAD4Q13485 552 aaKnown RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 ZNF141Q15928 474 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 ELOA3BQ3SY89 546 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 CCDC92Q53HC0 331 aaPredicted RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 Q8N402 240 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 ELOA3Q8NG57 546 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 C3orf49Q96BT1 292 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.6□□□□□ -0.71
UBR4-207ENST00000425413 TRAPPC4Q9Y296 219 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 CNTRLQ7Z7A1 2325 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 DMDP11532 3685 aa10.6□□□□□ -0.71
UBR4-207ENST00000425413 A0A0B4J203 849 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 IDSB3KWA1 339 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 NPIPB9F8W1W9 429 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 IDH3BO43837 385 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 NUDT14O95848 222 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 EFNA3P52797 238 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 HSD17B7P56937 341 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 HNRNPKP61978 463 aaKnown RBP eCLIP10.59□□□□□ -0.71
UBR4-207ENST00000425413 FUT7Q11130 342 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 GRM7Q14831 915 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 C14orf28Q4W4Y0 310 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 C6orf183Q5T699 404 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 RPL13AP3Q6NVV1 102 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 XKRXQ6PP77 449 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 RAB43Q86YS6 212 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 MED18Q9BUE0 208 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 RTN4RQ9BZR6 473 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 B3GAT2Q9NPZ5 323 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 MPDZO75970 2070 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 LMO7DNF2Z398 122 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 ZNF749O43361 778 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 FOLR1P15328 257 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 ITPKBP27987 946 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 MAGEB1P43366 347 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 ZNF544Q6NX49 715 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 ARHGAP11AQ6P4F7 1023 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 GRAMD2AQ8IUY3 354 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 LSMEM1Q8N8F7 131 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 UBASH3BQ8TF42 649 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 GHSRQ92847 366 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 ZDHHC12Q96GR4 267 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 Q96M85 177 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 MOGAT1Q96PD6 335 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 ELF4Q99607 663 aaPredicted RBP10.59□□□□□ -0.71
UBR4-207ENST00000425413 CTRCQ99895 268 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 ZNF426Q9BUY5 554 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 ERVMER34-1Q9H9K5 563 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 GNG8Q9UK08 70 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms