RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 GSSP48637 474 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 CRISP1P54107 249 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 AQP4P55087 323 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 PLGLB1Q02325 96 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 IL18R1Q13478 541 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 MED21Q13503 144 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 SLC10A1Q14973 349 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 INPP5JQ15735 1006 aaPredicted RBP9.36□□□□□ -0.91
MDC1-205ENST00000425072 HYAL4Q2M3T9 481 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 PLPPR5Q32ZL2 321 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 ZIK1Q3SY52 487 aaPredicted RBP9.36□□□□□ -0.91
MDC1-205ENST00000425072 ARSKQ6UWY0 536 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 RASSF6Q6ZTQ3 369 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 GALNTL5Q7Z4T8 443 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 SLC22A16Q86VW1 577 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 SLC43A2Q8N370 569 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 GTPBP8Q8N3Z3 284 aaPredicted RBP9.36□□□□□ -0.91
MDC1-205ENST00000425072 C10orf53Q8N6V4 93 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 OR9Q2Q8NGE9 314 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 LIPHQ8WWY8 451 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 TFAP2CQ92754 450 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 ZDHHC16Q969W1 377 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 NIPSNAP1Q9BPW8 284 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 NDEL1Q9GZM8 345 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 TOR3AQ9H497 397 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 KLHL1Q9NR64 748 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 FAM118AQ9NWS6 357 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 TUBA8Q9NY65 449 aaPredicted RBP9.36□□□□□ -0.91
MDC1-205ENST00000425072 CHRNA9Q9UGM1 479 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 TMEFF2Q9UIK5 374 aaPredicted RBP9.36□□□□□ -0.91
MDC1-205ENST00000425072 FBXL2Q9UKC9 423 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 C15orf41Q9Y2V0 281 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 RAXQ9Y2V3 346 aa9.36□□□□□ -0.91
MDC1-205ENST00000425072 NBEAQ8NFP9 2946 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 LOC400499M0QZD8 3231 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 AKAP13Q12802 2813 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 G3V3Y1 287 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 H3BN98 237 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 ACOT7O00154 380 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 SUSD5O60279 629 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 HCN1O60741 890 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 HMGN1P05114 100 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 SAGP10523 405 aaPredicted RBP9.35□□□□□ -0.91
MDC1-205ENST00000425072 ZNF17P17021 662 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 CCNA2P20248 432 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 FUT4P22083 530 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 GDF1P27539 372 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 ELK4P28324 431 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 GIPRP48546 466 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 NUP107P57740 925 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 GPR85P60893 370 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 RAC1P63000 192 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 ADARB1P78563 741 aaKnown RBP9.35□□□□□ -0.91
MDC1-205ENST00000425072 CRYZQ08257 329 aaKnown RBP9.35□□□□□ -0.91
MDC1-205ENST00000425072 FOXO1Q12778 655 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 TBR1Q16650 682 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 SLC36A3Q495N2 470 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 ZBED5Q49AG3 693 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 POMZP3Q6PJE2 187 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 KLHL17Q6TDP4 642 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 UNQ6494/PRO21346Q6UXR6 183 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 WDR88Q6ZMY6 472 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 GALNT5Q7Z7M9 940 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 OAFQ86UD1 273 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 CLDN22Q8N7P3 220 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 ZFP62Q8NB50 900 aaPredicted RBP9.35□□□□□ -0.91
MDC1-205ENST00000425072 SETD9Q8NE22 299 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 OR14L1PQ8NHC6 308 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 CYGBQ8WWM9 190 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 FAM46AQ96IP4 442 aaKnown RBP9.35□□□□□ -0.91
MDC1-205ENST00000425072 APOL4Q9BPW4 351 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 ADI1Q9BV57 179 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 TAPBPLQ9BX59 468 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 RIBC2Q9H4K1 309 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 MEPEQ9NQ76 525 aaPredicted RBP9.35□□□□□ -0.91
MDC1-205ENST00000425072 NANSQ9NR45 359 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 DEPPQ9NTK1 212 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 IL20Q9NYY1 176 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 TRAPPC4Q9Y296 219 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 HDGFL3Q9Y3E1 203 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 ZNF337Q9Y3M9 751 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 HSPE1-MOB4S4R3N1 261 aa9.35□□□□□ -0.91
MDC1-205ENST00000425072 APC2O95996 2303 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 USP9XQ93008 2570 aaPredicted RBP9.34□□□□□ -0.91
MDC1-205ENST00000425072 KPNA4O00629 521 aaPredicted RBP9.34□□□□□ -0.91
MDC1-205ENST00000425072 DLGAP1O14490 977 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 NPIPB7O75200 414 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 PTP4A3O75365 173 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 OR6A2O95222 327 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 AHSA1O95433 338 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 CH25HO95992 272 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 HPNP05981 417 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 TFPIP10646 304 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 CHMP24386 653 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 MST1P26927 711 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 POU1F1P28069 291 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 MEOX1P50221 254 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 TPD52P55327 224 aaPredicted RBP9.34□□□□□ -0.91
MDC1-205ENST00000425072 PRPS1P60891 318 aa9.34□□□□□ -0.91
MDC1-205ENST00000425072 SELENBP1Q13228 472 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms