RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 CCDC103Q8IW40 242 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 BBS10Q8TAM1 723 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 SIKE1Q9BRV8 207 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 TACO1Q9BSH4 297 aaKnown RBP15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 TMEM120AQ9BXJ8 343 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 CXXC4Q9H2H0 198 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 RABEP2Q9H5N1 569 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 ZNF226Q9NYT6 803 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 C2CD3Q4AC94 2353 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 TMEM247A6NEH6 219 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 KLF4O43474 513 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 FKBP2P26885 142 aaKnown RBP15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 HOXC5Q00444 222 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 PDK3Q15120 406 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 ZNF311Q5JNZ3 666 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 GCNT6Q5T4J0 391 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 DPP10Q8N608 796 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 PIK3IP1Q96FE7 263 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 ACTR6Q9GZN1 396 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 TMEM181Q9P2C4 612 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 LEF1Q9UJU2 399 aaPredicted RBP15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 TRAPPC4Q9Y296 219 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 GPR52Q9Y2T5 361 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 IFT52Q9Y366 437 aa15.81■□□□□ 0.12
SBDSP1-202ENST00000423945 ROS1P08922 2347 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 VPS13CQ709C8 3753 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 DNPH1O43598 174 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 TPST1O60507 370 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 ADAP00813 363 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 UQCRBP14927 111 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 ETS2P15036 469 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 PPP3CBP16298 524 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 PPIBP23284 216 aaKnown RBP15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 RIPPLY3P57055 190 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 OR2B6P58173 313 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 CDK6Q00534 326 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 BNIP2Q12982 314 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 ZSWIM7Q19AV6 140 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 DHDDSQ86SQ9 333 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 PTOV1Q86YD1 416 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 CADM2Q8N3J6 435 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 C3orf49Q96BT1 292 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 DDIT4LQ96D03 193 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 FOXC2Q99958 501 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 OR10A4Q9H209 315 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 TMEM38AQ9H6F2 299 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 FGFR1OP2Q9NVK5 253 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 ZNF232Q9UNY5 417 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 TRIM33Q9UPN9 1127 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 NDUFAF1Q9Y375 327 aa15.8■□□□□ 0.12
SBDSP1-202ENST00000423945 TMEM229AB2RXF0 380 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 C5orf58C9J3I9 102 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 FBP2O00757 339 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 RAF1P04049 648 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 CD53P19397 219 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 FPR1P21462 350 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 DNASE1P24855 282 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 SLC16A1P53985 500 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 SF3A3Q12874 501 aaKnown RBP eCLIP15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 GLIPR1L2Q4G1C9 344 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 SFRP5Q5T4F7 317 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 METTL21CQ5VZV1 264 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 WBP2NLQ6ICG8 309 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 REEP3Q6NUK4 255 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 SEZ6L2Q6UXD5 910 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 GALNT5Q7Z7M9 940 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 TSPEARQ8WU66 669 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 S100PBPQ96BU1 408 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 MBD6Q96DN6 1003 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 ANKRD27Q96NW4 1050 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 CGREF1Q99674 301 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 WFDC6Q9BQY6 131 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 PRDM4Q9UKN5 801 aa15.79■□□□□ 0.12
SBDSP1-202ENST00000423945 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 LIPT2A6NK58 231 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 NPIPB7O75200 414 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 CXCR1P25024 350 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 HTR2AP28223 471 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 PRKAR1BP31321 381 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 MAP2K6P52564 334 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 MTPNP58546 118 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 GUCY1A3Q02108 690 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 SCARB2Q14108 478 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 DHRS4L2Q6PKH6 230 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 Q6ZT83 130 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 ATG4DQ86TL0 474 aaPredicted RBP15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 PIGXQ8TBF5 258 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 SLC35B4Q969S0 331 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 ZHX1-C8orf76Q96EF9 292 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 POTEKPQ9BYX7 375 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 FANCFQ9NPI8 374 aa15.78■□□□□ 0.12
SBDSP1-202ENST00000423945 EVPLLA8MZ36 301 aa15.77■□□□□ 0.12
SBDSP1-202ENST00000423945 PLAUP00749 431 aa15.77■□□□□ 0.12
SBDSP1-202ENST00000423945 IGHV1-2P23083 117 aa15.77■□□□□ 0.12
SBDSP1-202ENST00000423945 P2RY4P51582 365 aa15.77■□□□□ 0.12
SBDSP1-202ENST00000423945 COPZ1P61923 177 aa15.77■□□□□ 0.12
SBDSP1-202ENST00000423945 SLC35A1P78382 337 aa15.77■□□□□ 0.12
SBDSP1-202ENST00000423945 ITGADQ13349 1161 aa15.77■□□□□ 0.12
SBDSP1-202ENST00000423945 CEACAM7Q14002 265 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms