RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, human

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB1-205	ENST00000423113	SLC25A32	Q9H2D1	315 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	POPDC3	Q9HBV1	291 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	MRPS30	Q9NP92	439 aa	Known RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	ACKR4	Q9NPB9	350 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	MEPE	Q9NQ76	525 aa	Predicted RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	NTM	Q9P121	344 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	SEMA5B	Q9P283	1151 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	FKBPL	Q9UIM3	349 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	PCDHGC4	Q9Y5F7	938 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	PCDHGA1	Q9Y5H4	931 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	IGHV1OR15-9	A0A0B4J2B8	117 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	SMCO3	A2RU48	225 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	NPEPPSL1	A6NEC2	478 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	ZNF593	O00488	134 aa	Predicted RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	ADAM10	O14672	748 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	PPP1R2P9	O14990	202 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	CASC3	O15234	703 aa	Known RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	TGOLN2	O43493	480 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	CDC40	O60508	579 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	REM1	O75628	298 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	APBB3	O95704	486 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	IFNA2	P01563	188 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	HPX	P02790	462 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	IGHV4-34	P06331	123 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	HCK	P08631	526 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	GKN3P	P0CG01	181 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	PRDX3	P30048	256 aa	Known RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	SLC6A1	P30531	599 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	SOAT1	P35610	550 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	MAP3K8	P41279	467 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	CHRNA4	P43681	627 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	STK19	P49842	368 aa	Predicted RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	AGTR2	P50052	363 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	PFN3	P60673	137 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	SNRPD1	P62314	119 aa	Known RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	SLC10A7	Q0GE19	358 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	SURF2	Q15527	256 aa	Predicted RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	ANKRD39	Q53RE8	183 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	ZNF789	Q5FWF6	425 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	SFTPA1	Q8IWL2	248 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	KRTCAP2	Q8N6L1	136 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	POMGNT2	Q8NAT1	580 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	OR1S2	Q8NGQ3	325 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	RHBDF1	Q96CC6	855 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	EID2B	Q96D98	161 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	MRGPRX1	Q96LB2	322 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	COPS8	Q99627	209 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	GPR21	Q99679	349 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	DPH2	Q9BQC3	489 aa	Predicted RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	CHRNA10	Q9GZZ6	450 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	ACTL8	Q9H568	366 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	PLCXD1	Q9NUJ7	323 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	RBM22	Q9NW64	420 aa	Known RBP eCLIP	4.53	□□□□□ -1.68	3e-6	■■■■■ 30.7
ITGB1-205	ENST00000423113	C2orf42	Q9NWW7	574 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	WSB2	Q9NYS7	404 aa	Predicted RBP	4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	FBXL3	Q9UKT7	428 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113	PCDHB10	Q9UN67	800 aa		4.53	□□□□□ -1.68
ITGB1-205	ENST00000423113		A0A087WZY1	265 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	TRAPPC13	A5PLN9	417 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	OR51F1	A6NGY5	319 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	FAM170B	A6NMN3	283 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	CLIC1	O00299	241 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	QSOX1	O00391	747 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	LAMTOR5	O43504	91 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	SMAD6	O43541	496 aa	Known RBP	4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	PRAF2	O60831	178 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	IGSF6	O95976	241 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	THBS1	P07996	1170 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	SAG	P10523	405 aa	Predicted RBP	4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	ERG	P11308	486 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	TIMP2	P16035	220 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	AHCY	P23526	432 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	ACVR2A	P27037	513 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	CHI3L1	P36222	383 aa	Predicted RBP	4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	GLP1R	P43220	463 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	CDKN1C	P49918	316 aa	Predicted RBP	4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	HTR6	P50406	440 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	AGFG1	P52594	562 aa	Known RBP	4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	MLLT11	Q13015	90 aa	Predicted RBP	4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	PTGES3	Q15185	160 aa	Known RBP	4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	C14orf28	Q4W4Y0	310 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	IFI44L	Q53G44	452 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	SLC22A10	Q63ZE4	541 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	PMS2CL	Q68D20	193 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	ZNF776	Q68DI1	518 aa	Predicted RBP	4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	FAM180A	Q6UWF9	173 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	SLC36A4	Q6YBV0	504 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	RNF165	Q6ZSG1	346 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	BEST3	Q8N1M1	668 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	C10orf53	Q8N6V4	93 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	OR1J4	Q8NGS1	313 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	OR1S1	Q8NH92	325 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	APH1B	Q8WW43	257 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	HGD	Q93099	445 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	ISOC2	Q96AB3	205 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	ARRDC3	Q96B67	414 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	FAM122A	Q96E09	287 aa		4.52	□□□□□ -1.69
ITGB1-205	ENST00000423113	CAMK1G	Q96NX5	476 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms