RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 SLC16A6O15403 523 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 AHSA1O95433 338 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 SP1P08047 785 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 GDF1P27539 372 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 GTF2E2P29084 291 aaKnown RBP15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 MAP2K6P52564 334 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 KEAP1Q14145 624 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 SLC25A53Q5H9E4 307 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 RAET1LQ5VY80 246 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 RPL13AP3Q6NVV1 102 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 OR2M7Q8NG81 312 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 STK35Q8TDR2 534 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 PRRG3Q9BZD7 231 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 GRIP2Q9C0E4 1043 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 IMPAD1Q9NX62 359 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 HRH3Q9Y5N1 445 aa15.52■□□□□ 0.08
CCDC28B-202ENST00000421922 TMEM72A0PK05 275 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 NME2P1O60361 137 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 HCN1O60741 890 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 OR7A10O76100 309 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 RCBTB2O95199 551 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 CH25HO95992 272 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 IGF2P01344 180 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 HIST1H2ABP04908 130 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 TFPIP10646 304 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 BMP7P18075 431 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 MAKP20794 623 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 NME2P22392 152 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 MYF6P23409 242 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 CHMP24386 653 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 ADH6P28332 368 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 SRD5A2P31213 254 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 SLC9A3P48764 834 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 TMPRSS3P57727 454 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 NUP107P57740 925 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 CDC42P60953 191 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 IL5RAQ01344 420 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 SELENBP1Q13228 472 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 PDK3Q15120 406 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 ZNF766Q5HY98 468 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 C3orf33Q6P1S2 294 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 UNQ6494/PRO21346Q6UXR6 183 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 HIST3H2AQ7L7L0 130 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 OAFQ86UD1 273 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 CHERPQ8IWX8 916 aaKnown RBP15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 DEPDC4Q8N2C3 294 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 MARVELD2Q8N4S9 558 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 FAM98AQ8NCA5 519 aaKnown RBP15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 MDS2Q8NDY4 140 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 ATP6V1C2Q8NEY4 427 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 OR13C2Q8NGS9 318 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 OR14L1PQ8NHC6 308 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 HIST1H2ACQ93077 130 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 CDH10Q9Y6N8 788 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 IGKV1D-42A0A075B6H8 117 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 SHISA8B8ZZ34 492 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 ZNF208O43345 1280 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 TRAPPC6AO75865 159 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 CEACAM4O75871 244 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 CLIC3O95833 236 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 POLR2IP36954 125 aaKnown RBP15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 MEOX1P50221 254 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 SMSP52788 366 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 DLX5P56178 289 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 C1orf140Q5VVS0 124 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 CASP12Q6UXS9 341 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 ZNF620Q6ZNG0 422 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 GALNTL5Q7Z4T8 443 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 ADGRG3Q86Y34 549 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 SULF2Q8IWU5 870 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 ZADH2Q8N4Q0 377 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 CLDN22Q8N7P3 220 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 KDF1Q8NAX2 398 aaPredicted RBP15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 FAM81AQ8TBF8 368 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 SLC25A43Q8WUT9 341 aaPredicted RBP15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 GATA6Q92908 595 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 GPA33Q99795 319 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 PIGQQ9BRB3 760 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 HES7Q9BYE0 225 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 NANSQ9NR45 359 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 DEPPQ9NTK1 212 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 REV1Q9UBZ9 1251 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 RPH3AQ9Y2J0 694 aaPredicted RBP15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 ZNF337Q9Y3M9 751 aa15.51■□□□□ 0.07
CCDC28B-202ENST00000421922 B4DXG7 233 aa15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 MKRN2OSH3BPM6 223 aa15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 ACOT7O00154 380 aa15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 ETV2O00321 342 aaPredicted RBP15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 KLF4O43474 513 aa15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 OR2T1O43869 369 aa15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 GNAO1P09471 354 aa15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 ZNF17P17021 662 aa15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 FUT1P19526 365 aa15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 FKBP2P26885 142 aaKnown RBP15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 ELK4P28324 431 aa15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 RPS5P46782 204 aaKnown RBP15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 TLE3Q04726 772 aa15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 PTGES3Q15185 160 aaKnown RBP15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 ZNF691Q5VV52 312 aa15.5■□□□□ 0.07
CCDC28B-202ENST00000421922 SLC27A4Q6P1M0 643 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms