RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 MSANTD1Q6ZTZ1 278 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 BHLHA15Q7RTS1 189 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-206ENST00000420121 GALNT5Q7Z7M9 940 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 BIVMQ86UB2 503 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 VRK2Q86Y07 508 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 P3H2Q8IVL5 708 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 FUNDC1Q8IVP5 155 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 CCDC103Q8IW40 242 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 ZNF433Q8N7K0 673 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-206ENST00000420121 SLC38A5Q8WUX1 472 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 HSD17B8Q92506 261 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 AKAP1Q92667 903 aaKnown RBP eCLIP9.75□□□□□ -0.85
SSBP3-206ENST00000420121 GTF2H4Q92759 462 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 PMM1Q92871 262 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 NEUROG1Q92886 237 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 PERPQ96FX8 193 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 Q96MF0 132 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 ZBTB18Q99592 522 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 POTEKPQ9BYX7 375 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 ADAM19Q9H013 955 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 PAIP1Q9H074 479 aaKnown RBP9.75□□□□□ -0.85
SSBP3-206ENST00000420121 HEATR1Q9H583 2144 aaKnown RBP9.75□□□□□ -0.85
SSBP3-206ENST00000420121 TPT1P8Q9HAU6 139 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 SLC52A3Q9NQ40 469 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 RLIMQ9NVW2 624 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 NKIRAS1Q9NYS0 192 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 NPAP1Q9NZP6 1156 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 TMED7Q9Y3B3 224 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 SPIN1Q9Y657 262 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-206ENST00000420121 USH1CQ9Y6N9 552 aa9.75□□□□□ -0.85
SSBP3-206ENST00000420121 TRIM64A6NGJ6 449 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 TRIM64BA6NI03 449 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 OVOL3O00110 214 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 UBDO15205 165 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 ZNF208O43345 1280 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 ERLIN1O75477 346 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 CNOT4O95628 575 aaKnown RBP9.74□□□□□ -0.85
SSBP3-206ENST00000420121 BCHEP06276 602 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 DBIP07108 87 aaKnown RBP9.74□□□□□ -0.85
SSBP3-206ENST00000420121 THBS1P07996 1170 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 IL7RP16871 459 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 CCNA2P20248 432 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 FKBP2P26885 142 aaKnown RBP9.74□□□□□ -0.85
SSBP3-206ENST00000420121 SLC1A3P43003 542 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 HTR3AP46098 478 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 ANXA11P50995 505 aaKnown RBP9.74□□□□□ -0.85
SSBP3-206ENST00000420121 POLR2HP52434 150 aaKnown RBP9.74□□□□□ -0.85
SSBP3-206ENST00000420121 POLR2JP52435 117 aaKnown RBP9.74□□□□□ -0.85
SSBP3-206ENST00000420121 BSPH1Q075Z2 132 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 RPS26P11Q5JNZ5 115 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-206ENST00000420121 ALKBH2Q6NS38 261 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 Q71RC1 249 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-206ENST00000420121 YTHDF3Q7Z739 585 aaKnown RBP9.74□□□□□ -0.85
SSBP3-206ENST00000420121 MSRB3Q8IXL7 192 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 C10orf111Q8N326 155 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 CLIP4Q8N3C7 705 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 KBTBD8Q8NFY9 601 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 C7orf26Q96N11 449 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 EBF4Q9BQW3 602 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 SLCO1B3Q9NPD5 702 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 SLC25A37Q9NYZ2 338 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 TMEM181Q9P2C4 612 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 P2RX2Q9UBL9 471 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 TRAPPC4Q9Y296 219 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 RNF115Q9Y4L5 304 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 PCDHB14Q9Y5E9 798 aa9.74□□□□□ -0.85
SSBP3-206ENST00000420121 FAM234BA2RU67 622 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 CFAP73A6NFT4 308 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 H7C1Q1 480 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 PDLIM1O00151 329 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 IGHV3-9P01782 118 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 SOD3P08294 240 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 ITGA5P08648 1049 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 GKN3PP0CG01 181 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 BMP2P12643 396 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 PRG2P13727 222 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 CRATP43155 626 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 OR2B6P58173 313 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 DSTNP60981 165 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 LTBQ06643 244 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 PGGHGQ32M88 737 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 TTMPQ5BVD1 217 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 RNF220Q5VTB9 566 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 DMRTA1Q5VZB9 504 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 FBXW9Q5XUX1 488 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 SLC2A7Q6PXP3 512 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 MIER2Q8N344 545 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 OR52P1PQ8NH57 321 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 PIGXQ8TBF5 258 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 TMEM171Q8WVE6 324 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 TMEM19Q96HH6 336 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 ITCHQ96J02 903 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 USB1Q9BQ65 265 aaKnown RBP9.73□□□□□ -0.85
SSBP3-206ENST00000420121 TRIM2Q9C040 744 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 ESRP2Q9H6T0 727 aaKnown RBP9.73□□□□□ -0.85
SSBP3-206ENST00000420121 EMC3Q9P0I2 261 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 MALT1Q9UDY8 824 aa9.73□□□□□ -0.85
SSBP3-206ENST00000420121 ZNF443Q9Y2A4 671 aaPredicted RBP9.73□□□□□ -0.85
SSBP3-206ENST00000420121 NOSIPQ9Y314 301 aaKnown RBP9.73□□□□□ -0.85
SSBP3-206ENST00000420121 FLVCR1Q9Y5Y0 555 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms