RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ARL8BQ9NVJ2 186 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 CHST2Q9Y4C5 530 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 DSPPQ9NZW4 1301 aa16■□□□□ 0.15
VCP-202ENST00000417448 A0A0G2JPF8 293 aa16■□□□□ 0.15
VCP-202ENST00000417448 CCT8L1PA6NM43 557 aa16■□□□□ 0.15
VCP-202ENST00000417448 BBIP1A8MTZ0 92 aa16■□□□□ 0.15
VCP-202ENST00000417448 A8MV72 311 aaPredicted RBP16■□□□□ 0.15
VCP-202ENST00000417448 HNRNPCL2B2RXH8 293 aa16■□□□□ 0.15
VCP-202ENST00000417448 HNRNPCL3B7ZW38 293 aa16■□□□□ 0.15
VCP-202ENST00000417448 C16orf97H3BN30 126 aa16■□□□□ 0.15
VCP-202ENST00000417448 SEC14L5O43304 696 aa16■□□□□ 0.15
VCP-202ENST00000417448 FRS3O43559 492 aa16■□□□□ 0.15
VCP-202ENST00000417448 EIF4E2O60573 245 aaKnown RBP16■□□□□ 0.15
VCP-202ENST00000417448 HNRNPCL1O60812 293 aaKnown RBP16■□□□□ 0.15
VCP-202ENST00000417448 TMCC2O75069 709 aa16■□□□□ 0.15
VCP-202ENST00000417448 CGAP01215 116 aa16■□□□□ 0.15
VCP-202ENST00000417448 DBIP07108 87 aaKnown RBP16■□□□□ 0.15
VCP-202ENST00000417448 LINGO3P0C6S8 592 aa16■□□□□ 0.15
VCP-202ENST00000417448 HNRNPCL4P0DMR1 293 aa16■□□□□ 0.15
VCP-202ENST00000417448 PEPDP12955 493 aa16■□□□□ 0.15
VCP-202ENST00000417448 SHC1P29353 583 aa16■□□□□ 0.15
VCP-202ENST00000417448 KIR2DL2P43627 348 aaPredicted RBP16■□□□□ 0.15
VCP-202ENST00000417448 GZMMP51124 257 aa16■□□□□ 0.15
VCP-202ENST00000417448 CLDN15P56746 228 aa16■□□□□ 0.15
VCP-202ENST00000417448 CLDN20P56880 219 aa16■□□□□ 0.15
VCP-202ENST00000417448 SRSF2Q01130 221 aaKnown RBP16■□□□□ 0.15
VCP-202ENST00000417448 QPRTQ15274 297 aa16■□□□□ 0.15
VCP-202ENST00000417448 TMEM44Q2T9K0 475 aa16■□□□□ 0.15
VCP-202ENST00000417448 ENPP6Q6UWR7 440 aa16■□□□□ 0.15
VCP-202ENST00000417448 COMTD1Q86VU5 262 aa16■□□□□ 0.15
VCP-202ENST00000417448 PEX5LQ8IYB4 626 aa16■□□□□ 0.15
VCP-202ENST00000417448 ZNF611Q8N823 705 aa16■□□□□ 0.15
VCP-202ENST00000417448 OR5W2Q8NH69 310 aa16■□□□□ 0.15
VCP-202ENST00000417448 ELOVL5Q9NYP7 299 aa16■□□□□ 0.15
VCP-202ENST00000417448 CALML5Q9NZT1 146 aa16■□□□□ 0.15
VCP-202ENST00000417448 LAMP3Q9UQV4 416 aa16■□□□□ 0.15
VCP-202ENST00000417448 ZNF443Q9Y2A4 671 aaPredicted RBP16■□□□□ 0.15
VCP-202ENST00000417448 GMEB1Q9Y692 573 aa16■□□□□ 0.15
VCP-202ENST00000417448 MEGF8Q7Z7M0 2845 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 HS3ST1O14792 307 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 TPST1O60507 370 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 GCM2O75603 506 aaPredicted RBP15.99■□□□□ 0.15
VCP-202ENST00000417448 CRHP06850 196 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 PRG2P13727 222 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 ZNF708P17019 499 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 SLC6A2P23975 617 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 GCKP35557 465 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 SIRPAP78324 504 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 HOXC5Q00444 222 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 GANABQ14697 944 aaKnown RBP15.99■□□□□ 0.15
VCP-202ENST00000417448 GLIPR1L2Q4G1C9 344 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 COQ5Q5HYK3 327 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 ZNF311Q5JNZ3 666 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 REEP3Q6NUK4 255 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 PCYOX1LQ8NBM8 494 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 FAM71CQ8NEG0 241 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 TOR1AIP2Q8NFQ8 470 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 DNAJA3Q96EY1 480 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 BCL2L10Q9HD36 194 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 MRGBPQ9NV56 204 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 GID8Q9NWU2 228 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 CMTM6Q9NX76 183 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 THUMPD1Q9NXG2 353 aaKnown RBP15.99■□□□□ 0.15
VCP-202ENST00000417448 CORO2BQ9UQ03 480 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 SLC35A3Q9Y2D2 325 aa15.99■□□□□ 0.15
VCP-202ENST00000417448 OVOL3O00110 214 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 FAM107AO95990 144 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 OPN1SWP03999 348 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 PRKCAP17252 672 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 CCNA2P20248 432 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 PSMA4P25789 261 aaKnown RBP15.98■□□□□ 0.15
VCP-202ENST00000417448 ACVR1BP36896 505 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 NUDT2P50583 147 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 BEX5Q5H9J7 111 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 AAGABQ6PD74 315 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 DNM1P46Q6ZS02 220 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 BBS10Q8TAM1 723 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 ECSITQ9BQ95 431 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 PRR14Q9BWN1 585 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 TMEM38AQ9H6F2 299 aa15.98■□□□□ 0.15
VCP-202ENST00000417448 A0A087WZY1 265 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 GPRIN2O60269 458 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 PABPC4LP0CB38 370 aaKnown RBP15.97■□□□□ 0.15
VCP-202ENST00000417448 SFTPDP35247 375 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 KCNJ5P48544 419 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 IDH2P48735 452 aaKnown RBP15.97■□□□□ 0.15
VCP-202ENST00000417448 SESN3P58005 492 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 CBFBQ13951 182 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 GNA13Q14344 377 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 ETFDHQ16134 617 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 GLYR1Q49A26 553 aaPredicted RBP15.97■□□□□ 0.15
VCP-202ENST00000417448 C6orf52Q5T4I8 152 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 GKAP1Q5VSY0 366 aaPredicted RBP15.97■□□□□ 0.15
VCP-202ENST00000417448 CALHM3Q86XJ0 350 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 GTPBP8Q8N3Z3 284 aaPredicted RBP15.97■□□□□ 0.15
VCP-202ENST00000417448 FITM2Q8N6M3 262 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 ZNF610Q8N9Z0 462 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 SMYD1Q8NB12 490 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 C11orf65Q8NCR3 313 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 ZNF563Q8TA94 476 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms