RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 ZNF701Q9NV72 531 aaPredicted RBP15.8■□□□□ 0.12
CPNE1-210ENST00000416778 PCDHB14Q9Y5E9 798 aa15.8■□□□□ 0.12
CPNE1-210ENST00000416778 DSPPQ9NZW4 1301 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 RAI1Q7Z5J4 1906 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-210ENST00000416778 TGDSO95455 350 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 ANP32DO95626 131 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 GKN3PP0CG01 181 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 MRPL19P49406 292 aaKnown RBP15.79■□□□□ 0.12
CPNE1-210ENST00000416778 IDH3AP50213 366 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 FBXW9Q5XUX1 488 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 YTHDF3Q7Z739 585 aaKnown RBP15.79■□□□□ 0.12
CPNE1-210ENST00000416778 ATG4DQ86TL0 474 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-210ENST00000416778 FUNDC1Q8IVP5 155 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 CIARTQ8N365 385 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-210ENST00000416778 CLIP4Q8N3C7 705 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 ZHX1-C8orf76Q96EF9 292 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 PERPQ96FX8 193 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 AURKBQ96GD4 344 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-210ENST00000416778 POTEKPQ9BYX7 375 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 PAIP1Q9H074 479 aaKnown RBP15.79■□□□□ 0.12
CPNE1-210ENST00000416778 ESRP2Q9H6T0 727 aaKnown RBP15.79■□□□□ 0.12
CPNE1-210ENST00000416778 CALML5Q9NZT1 146 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 EMC3Q9P0I2 261 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 P2RX2Q9UBL9 471 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 NOSIPQ9Y314 301 aaKnown RBP15.79■□□□□ 0.12
CPNE1-210ENST00000416778 CHST2Q9Y4C5 530 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 USF3Q68DE3 2245 aa15.79■□□□□ 0.12
CPNE1-210ENST00000416778 A0A0G2JPF8 293 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 ZC3H12DA2A288 527 aaKnown RBP15.78■□□□□ 0.12
CPNE1-210ENST00000416778 HNRNPCL2B2RXH8 293 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 HNRNPCL3B7ZW38 293 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 GPR171O14626 319 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 EIF1BO60739 113 aaKnown RBP15.78■□□□□ 0.12
CPNE1-210ENST00000416778 HNRNPCL1O60812 293 aaKnown RBP15.78■□□□□ 0.12
CPNE1-210ENST00000416778 TMCC2O75069 709 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 CD3EP07766 207 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 HNRNPCL4P0DMR1 293 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 COX5AP20674 150 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 PTH2RP49190 550 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 DSTNP60981 165 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 SLC35A1P78382 337 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 CAPRIN1Q14444 709 aaKnown RBP15.78■□□□□ 0.12
CPNE1-210ENST00000416778 RGNQ15493 299 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 KRTAP21-3Q3LHN1 58 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 DNAJC14Q6Y2X3 702 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-210ENST00000416778 P2RY8Q86VZ1 359 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 ZNF440Q8IYI8 595 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 PIGXQ8TBF5 258 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 DDIT4LQ96D03 193 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 SLCO1B3Q9NPD5 702 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 SLC52A3Q9NQ40 469 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 THUMPD1Q9NXG2 353 aaKnown RBP15.78■□□□□ 0.12
CPNE1-210ENST00000416778 ZNF232Q9UNY5 417 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 NAV3Q8IVL0 2385 aa15.78■□□□□ 0.12
CPNE1-210ENST00000416778 CLIC1O00299 241 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 IGHV3-9P01782 118 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 NUDT7P0C024 238 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 DANCRP0C864 163 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 HOXB9P17482 250 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-210ENST00000416778 CRISP3P54108 245 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 TIMM23BQ5SRD1 257 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 SLC2A7Q6PXP3 512 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 ZNF836Q6ZNA1 936 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 TMEM171Q8WVE6 324 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 NEUROG1Q92886 237 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 APH1AQ96BI3 265 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 Q96MF0 132 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 NAA11Q9BSU3 229 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-210ENST00000416778 RSPO3Q9BXY4 272 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-210ENST00000416778 BCL2L10Q9HD36 194 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 RNF115Q9Y4L5 304 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 CADP27708 2225 aa15.77■□□□□ 0.12
CPNE1-210ENST00000416778 OVOL3O00110 214 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 MRPL33O75394 65 aaKnown RBP15.76■□□□□ 0.11
CPNE1-210ENST00000416778 BCHEP06276 602 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 THBS1P07996 1170 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 BMP2P12643 396 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 PRG2P13727 222 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 GGT1P19440 569 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 CXCR1P25024 350 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 ADSLP30566 484 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-210ENST00000416778 BSPH1Q075Z2 132 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 SLC17A1Q14916 467 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 PPA1Q15181 289 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 ZSWIM7Q19AV6 140 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 ZNF672Q499Z4 452 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-210ENST00000416778 LIN52Q52LA3 116 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 RPS26P11Q5JNZ5 115 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-210ENST00000416778 C6orf10Q5SRN2 563 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 BLOC1S3Q6QNY0 202 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 MUCL1Q96DR8 90 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 TMEM19Q96HH6 336 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 ATP6V1G3Q96LB4 118 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 MUS81Q96NY9 551 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 EBF4Q9BQW3 602 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 CCDC28BQ9BUN5 200 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 BDH2Q9BUT1 245 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 SPATA9Q9BWV2 254 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 CXorf56Q9H5V9 222 aa15.76■□□□□ 0.11
CPNE1-210ENST00000416778 TCF7L2Q9NQB0 619 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms