RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CSNK2A1P68400 391 aaPredicted RBP13.33□□□□□ -0.28
UBXN4-203ENST00000416538 H3F3AP84243 136 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 BSPH1Q075Z2 132 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 CAPRIN1Q14444 709 aaKnown RBP13.33□□□□□ -0.28
UBXN4-203ENST00000416538 KRTAP21-3Q3LHN1 58 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 TTMPQ5BVD1 217 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 ADAM5Q6NVV9 412 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 GALNT5Q7Z7M9 940 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 CMIPQ8IY22 773 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 SLC38A5Q8WUX1 472 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 EBF4Q9BQW3 602 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 PAIP1Q9H074 479 aaKnown RBP13.33□□□□□ -0.28
UBXN4-203ENST00000416538 TPT1P8Q9HAU6 139 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 ZNF701Q9NV72 531 aaPredicted RBP13.33□□□□□ -0.28
UBXN4-203ENST00000416538 HDGFL3Q9Y3E1 203 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 USH1CQ9Y6N9 552 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 SONP18583 2426 aaKnown RBP13.32□□□□□ -0.28
UBXN4-203ENST00000416538 CDHR4A6H8M9 788 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 FAAHO00519 579 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 UBDO15205 165 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 CLOCKO15516 846 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 ARHGEF9O43307 516 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 KRT75O95678 551 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 DBIP07108 87 aaKnown RBP13.32□□□□□ -0.28
UBXN4-203ENST00000416538 TFPTP0C1Z6 253 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 DANCRP0C864 163 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 ZCCHC18P0CG32 403 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 PAX1P15863 534 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 POLR2HP52434 150 aaKnown RBP13.32□□□□□ -0.28
UBXN4-203ENST00000416538 POLR2JP52435 117 aaKnown RBP13.32□□□□□ -0.28
UBXN4-203ENST00000416538 DSTNP60981 165 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 TXNL4AP83876 142 aaKnown RBP13.32□□□□□ -0.28
UBXN4-203ENST00000416538 LTBQ06643 244 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 LRRC74AQ0VAA2 488 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 PDK3Q15120 406 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 STK11Q15831 433 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 GSTA3Q16772 222 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 SLC2A7Q6PXP3 512 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 EPGNQ6UW88 154 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 PRSS57Q6UWY2 283 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 COMTD1Q86VU5 262 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 MSRB3Q8IXL7 192 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 CLIP4Q8N3C7 705 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 ZNF433Q8N7K0 673 aaPredicted RBP13.32□□□□□ -0.28
UBXN4-203ENST00000416538 GTF2H4Q92759 462 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 TMEM19Q96HH6 336 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 HDHD5Q9BXW7 423 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 SLC25A37Q9NYZ2 338 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 P2RX2Q9UBL9 471 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 ZNF443Q9Y2A4 671 aaPredicted RBP13.32□□□□□ -0.28
UBXN4-203ENST00000416538 SPIN1Q9Y657 262 aaPredicted RBP13.32□□□□□ -0.28
UBXN4-203ENST00000416538 ARFGEF3Q5TH69 2177 aa13.32□□□□□ -0.28
UBXN4-203ENST00000416538 ABCA1O95477 2261 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 CFAP73A6NFT4 308 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 SHISA9B4DS77 424 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 FRS3O43559 492 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 DNPH1O43598 174 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 RAD51DO75771 328 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 PGM3O95394 542 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 LY6G6DO95868 133 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 ITGA5P08648 1049 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 IL7RP16871 459 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 SLC1A3P43003 542 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 CRATP43155 626 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 OR2B6P58173 313 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 SPOCK1Q08629 439 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 BNIP2Q12982 314 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 PGGHGQ32M88 737 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 AGBL2Q5U5Z8 902 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 MSANTD1Q6ZTZ1 278 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 FUNDC1Q8IVP5 155 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 ZNF100Q8IYN0 542 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 OR52E4Q8NGH9 312 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 OR52P1PQ8NH57 321 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 PIGXQ8TBF5 258 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 TMEM171Q8WVE6 324 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 HSD17B8Q92506 261 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 MAL2Q969L2 176 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 C7orf26Q96N11 449 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 TRIM2Q9C040 744 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 ADAM19Q9H013 955 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 MTHFD2LQ9H903 347 aaPredicted RBP13.31□□□□□ -0.28
UBXN4-203ENST00000416538 TMEM181Q9P2C4 612 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 MALT1Q9UDY8 824 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 LAMP3Q9UQV4 416 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 NOSIPQ9Y314 301 aaKnown RBP13.31□□□□□ -0.28
UBXN4-203ENST00000416538 MAGED1Q9Y5V3 778 aaPredicted RBP13.31□□□□□ -0.28
UBXN4-203ENST00000416538 FLVCR1Q9Y5Y0 555 aa13.31□□□□□ -0.28
UBXN4-203ENST00000416538 YLPM1P49750 1951 aaKnown RBP13.31□□□□□ -0.28
UBXN4-203ENST00000416538 A0A1W2PR80 420 aa13.3□□□□□ -0.28
UBXN4-203ENST00000416538 FAM234BA2RU67 622 aa13.3□□□□□ -0.28
UBXN4-203ENST00000416538 OVOL3O00110 214 aa13.3□□□□□ -0.28
UBXN4-203ENST00000416538 PDLIM1O00151 329 aa13.3□□□□□ -0.28
UBXN4-203ENST00000416538 SMAD7O15105 426 aaKnown RBP13.3□□□□□ -0.28
UBXN4-203ENST00000416538 ZNF208O43345 1280 aa13.3□□□□□ -0.28
UBXN4-203ENST00000416538 ERLIN1O75477 346 aa13.3□□□□□ -0.28
UBXN4-203ENST00000416538 CD3EP07766 207 aa13.3□□□□□ -0.28
UBXN4-203ENST00000416538 HTR3AP46098 478 aa13.3□□□□□ -0.28
UBXN4-203ENST00000416538 MRPL19P49406 292 aaKnown RBP13.3□□□□□ -0.28
UBXN4-203ENST00000416538 ANXA11P50995 505 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms