RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SCARB2Q14108 478 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 SMN1Q16637 294 aaKnown RBP13.26□□□□□ -0.29
SGCE-202ENST00000415788 SPANXN2Q5MJ10 180 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 TYW3Q6IPR3 259 aaKnown RBP13.26□□□□□ -0.29
SGCE-202ENST00000415788 FRRS1Q6ZNA5 592 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 Q6ZS92 163 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 GDPD3Q7L5L3 318 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 ZNF227Q86WZ6 799 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 ATG16L2Q8NAA4 619 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 TMEM178AQ8NBL3 297 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 BARD1Q99728 777 aaKnown RBP13.26□□□□□ -0.29
SGCE-202ENST00000415788 TREX2Q9BQ50 279 aaPredicted RBP13.26□□□□□ -0.29
SGCE-202ENST00000415788 NUAK2Q9H093 628 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 SLC38A1Q9H2H9 487 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 FKBP14Q9NWM8 211 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 FBXO34Q9NWN3 711 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 KLF13Q9Y2Y9 288 aaPredicted RBP13.26□□□□□ -0.29
SGCE-202ENST00000415788 SAMHD1Q9Y3Z3 626 aaKnown RBP13.26□□□□□ -0.29
SGCE-202ENST00000415788 LYVE1Q9Y5Y7 322 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 DMXL2Q8TDJ6 3036 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 DSPPQ9NZW4 1301 aa13.26□□□□□ -0.29
SGCE-202ENST00000415788 FCMRO60667 390 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 ICOSLGO75144 302 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 CDK1P06493 297 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 SP1P08047 785 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 TRAPPC2P0DI81 140 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 TRAPPC2BP0DI82 140 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 EVI2BP34910 448 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 PCGF2P35227 344 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 TGFBR1P36897 503 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 ARPC4P59998 168 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.25□□□□□ -0.29
SGCE-202ENST00000415788 VEZF1Q14119 521 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 GPR68Q15743 365 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 SLC25A25Q6KCM7 469 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 MDGA2Q7Z553 956 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 GALNT10Q86SR1 603 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 ENTHD1Q8IYW4 607 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 OR6F1Q8NGZ6 308 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 NFKBIDQ8NI38 313 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 RNF138Q8WVD3 245 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 APH1BQ8WW43 257 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 SCMH1Q96GD3 660 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 EPYCQ99645 322 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 SLC25A18Q9H1K4 315 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 METTL7AQ9H8H3 244 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 CACYBPQ9HB71 228 aaKnown RBP13.25□□□□□ -0.29
SGCE-202ENST00000415788 TRAPPC4Q9Y296 219 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 A0A1W2PQD3 144 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 PRAMEF25A6NGN4 478 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 NPIPB9F8W1W9 429 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 K7EM74 188 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 SCDO00767 359 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 NME2P1O60361 137 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 PDE9AO76083 593 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 ZIC2O95409 532 aaPredicted RBP13.25□□□□□ -0.29
SGCE-202ENST00000415788 CCL3P10147 92 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 ENDOUP21128 410 aaKnown RBP13.25□□□□□ -0.29
SGCE-202ENST00000415788 NME2P22392 152 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 GTF2E2P29084 291 aaKnown RBP13.25□□□□□ -0.29
SGCE-202ENST00000415788 NKX2-5P52952 324 aaPredicted RBP13.25□□□□□ -0.29
SGCE-202ENST00000415788 UGT2B15P54855 530 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 OR2B6P58173 313 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 CHRNEQ04844 493 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 ZNF141Q15928 474 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 CARTPTQ16568 116 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 TIMM50Q3ZCQ8 353 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 ZNF766Q5HY98 468 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 SLC30A6Q6NXT4 461 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 CBLL1Q75N03 491 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 EIF3MQ7L2H7 374 aaKnown RBP13.25□□□□□ -0.29
SGCE-202ENST00000415788 ZAR1Q86SH2 424 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 KRT73Q86Y46 540 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 PEX5LQ8IYB4 626 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 UBQLNLQ8IYU4 475 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 EXD3Q8N9H8 876 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 ASCC1Q8N9N2 400 aaKnown RBP13.25□□□□□ -0.29
SGCE-202ENST00000415788 OR4C3Q8NH37 302 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 RHNO1Q9BSD3 238 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 TBL1XR1Q9BZK7 514 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 RUBCNLQ9H714 662 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 KLRF1Q9NZS2 232 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 CRNNQ9UBG3 495 aaPredicted RBP13.25□□□□□ -0.29
SGCE-202ENST00000415788 AASSQ9UDR5 926 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 N6AMT1Q9Y5N5 214 aa13.25□□□□□ -0.29
SGCE-202ENST00000415788 ZFHX4Q86UP3 3567 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 MAP1BP46821 2468 aaKnown RBP13.24□□□□□ -0.29
SGCE-202ENST00000415788 CLCA1A8K7I4 914 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 ALG1L2C9J202 215 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 KLRC4-KLRK1H3BQV0 150 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 CNR1P21554 472 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 DDOSTP39656 456 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 HTR3AP46098 478 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 ZNF169Q14929 603 aaPredicted RBP13.24□□□□□ -0.29
SGCE-202ENST00000415788 VASH1Q7L8A9 365 aaPredicted RBP13.24□□□□□ -0.29
SGCE-202ENST00000415788 CCDC190Q86UF4 302 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 CCDC71Q8IV32 467 aaPredicted RBP13.24□□□□□ -0.29
SGCE-202ENST00000415788 MISPQ8IVT2 679 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 RBMXL3Q8N7X1 1067 aaKnown RBP13.24□□□□□ -0.29
SGCE-202ENST00000415788 ZNF607Q96SK3 696 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms