RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 NAA11Q9BSU3 229 aaPredicted RBP22.11■■□□□ 1.13
HLA-C-204ENST00000415537 CXorf56Q9H5V9 222 aa22.11■■□□□ 1.13
HLA-C-204ENST00000415537 ARMC7Q9H6L4 198 aa22.11■■□□□ 1.13
HLA-C-204ENST00000415537 RLIMQ9NVW2 624 aa22.11■■□□□ 1.13
HLA-C-204ENST00000415537 ZNF232Q9UNY5 417 aa22.11■■□□□ 1.13
HLA-C-204ENST00000415537 RNF115Q9Y4L5 304 aa22.11■■□□□ 1.13
HLA-C-204ENST00000415537 CLOCKO15516 846 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 EIF1BO60739 113 aaKnown RBP22.1■■□□□ 1.13
HLA-C-204ENST00000415537 ROS1P08922 2347 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 INHBBP09529 407 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 TFPTP0C1Z6 253 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 IGHV1-2P23083 117 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 SLC35A1P78382 337 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 LARS2Q15031 903 aaKnown RBP22.1■■□□□ 1.13
HLA-C-204ENST00000415537 MAPK11Q15759 364 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 FBXW9Q5XUX1 488 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 YTHDF3Q7Z739 585 aaKnown RBP22.1■■□□□ 1.13
HLA-C-204ENST00000415537 CCDC103Q8IW40 242 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 SLC38A5Q8WUX1 472 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 APH1AQ96BI3 265 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 AURKBQ96GD4 344 aaPredicted RBP22.1■■□□□ 1.13
HLA-C-204ENST00000415537 RAD21L1Q9H4I0 556 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 TCF7L2Q9NQB0 619 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 PRDM4Q9UKN5 801 aa22.1■■□□□ 1.13
HLA-C-204ENST00000415537 DSPPQ9NZW4 1301 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 CDHR4A6H8M9 788 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 ZNF716A6NP11 495 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 MRPL33O75394 65 aaKnown RBP22.09■■□□□ 1.13
HLA-C-204ENST00000415537 GKN3PP0CG01 181 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 GGT1P19440 569 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 CXCR1P25024 350 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 EDNRAP25101 427 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 COPZ1P61923 177 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 PPA1Q15181 289 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 ZSWIM7Q19AV6 140 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 ZNF836Q6ZNA1 936 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 SSX8Q7RTT4 187 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 DYDC1Q8WWB3 177 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 GTF2H4Q92759 462 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 TMEM19Q96HH6 336 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 ATP6V1G3Q96LB4 118 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 Q96MF0 132 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 GSX2Q9BZM3 304 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 ZNF443Q9Y2A4 671 aaPredicted RBP22.09■■□□□ 1.13
HLA-C-204ENST00000415537 PCDHB14Q9Y5E9 798 aa22.09■■□□□ 1.13
HLA-C-204ENST00000415537 A0A0G2JPF8 293 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 HNRNPCL2B2RXH8 293 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 HNRNPCL3B7ZW38 293 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 HNRNPCL1O60812 293 aaKnown RBP22.08■■□□□ 1.13
HLA-C-204ENST00000415537 TMCC2O75069 709 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 IGHV3-9P01782 118 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 HNRNPCL4P0DMR1 293 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 PTH2RP49190 550 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 SLC16A1P53985 500 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 P2RY8Q86VZ1 359 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 CADM2Q8N3J6 435 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 FBXW5Q969U6 566 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 BDH2Q9BUT1 245 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 ADAM19Q9H013 955 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 SLCO1B3Q9NPD5 702 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 IFT52Q9Y366 437 aa22.08■■□□□ 1.13
HLA-C-204ENST00000415537 CIB4A0PJX0 185 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 CLIC1O00299 241 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 THBS1P07996 1170 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 COX5AP20674 150 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 H3F3AP84243 136 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 RGNQ15493 299 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 RPS26P11Q5JNZ5 115 aaPredicted RBP22.07■■□□□ 1.12
HLA-C-204ENST00000415537 TIMM23BQ5SRD1 257 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 WBP2NLQ6ICG8 309 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 ADAM5Q6NVV9 412 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 SLC2A7Q6PXP3 512 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 GOLGA6L1Q8N7Z2 621 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 PAIP1Q9H074 479 aaKnown RBP22.07■■□□□ 1.12
HLA-C-204ENST00000415537 ASB6Q9NWX5 421 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 LAMP3Q9UQV4 416 aa22.07■■□□□ 1.12
HLA-C-204ENST00000415537 CCT8L1PA6NM43 557 aa22.06■■□□□ 1.12
HLA-C-204ENST00000415537 IMPDH2P12268 514 aa22.06■■□□□ 1.12
HLA-C-204ENST00000415537 NCF2P19878 526 aaPredicted RBP22.06■■□□□ 1.12
HLA-C-204ENST00000415537 MRPL19P49406 292 aaKnown RBP22.06■■□□□ 1.12
HLA-C-204ENST00000415537 IDH3AP50213 366 aa22.06■■□□□ 1.12
HLA-C-204ENST00000415537 BSPH1Q075Z2 132 aa22.06■■□□□ 1.12
HLA-C-204ENST00000415537 FADDQ13158 208 aa22.06■■□□□ 1.12
HLA-C-204ENST00000415537 RNF220Q5VTB9 566 aa22.06■■□□□ 1.12
HLA-C-204ENST00000415537 ZNF433Q8N7K0 673 aaPredicted RBP22.06■■□□□ 1.12
HLA-C-204ENST00000415537 SMR3AQ99954 134 aa22.06■■□□□ 1.12
HLA-C-204ENST00000415537 CCDC28BQ9BUN5 200 aa22.06■■□□□ 1.12
HLA-C-204ENST00000415537 PARPBPQ9NWS1 579 aa22.06■■□□□ 1.12
HLA-C-204ENST00000415537 ZC3H12DA2A288 527 aaKnown RBP22.05■■□□□ 1.12
HLA-C-204ENST00000415537 FAM171A2A8MVW0 826 aa22.05■■□□□ 1.12
HLA-C-204ENST00000415537 RAMP1O60894 148 aa22.05■■□□□ 1.12
HLA-C-204ENST00000415537 RAD51DO75771 328 aa22.05■■□□□ 1.12
HLA-C-204ENST00000415537 GPIP06744 558 aa22.05■■□□□ 1.12
HLA-C-204ENST00000415537 IDUAP35475 653 aa22.05■■□□□ 1.12
HLA-C-204ENST00000415537 ACAA2P42765 397 aaKnown RBP22.05■■□□□ 1.12
HLA-C-204ENST00000415537 RPS4XP62701 263 aaKnown RBP22.05■■□□□ 1.12
HLA-C-204ENST00000415537 ZNF311Q5JNZ3 666 aa22.05■■□□□ 1.12
HLA-C-204ENST00000415537 PAQR6Q6TCH4 344 aa22.05■■□□□ 1.12
HLA-C-204ENST00000415537 CASP12Q6UXS9 341 aa22.05■■□□□ 1.12
HLA-C-204ENST00000415537 CLIP4Q8N3C7 705 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms