RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 ANGPTL6Q8NI99 470 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 OMA1Q96E52 524 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 MED30Q96HR3 178 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 KXD1Q9BQD3 176 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 NDC1Q9BTX1 674 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 GSDMCQ9BYG8 508 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 KCNN2Q9H2S1 579 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 OR51J1Q9H342 316 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 DLL4Q9NR61 685 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 SATB2Q9UPW6 733 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 TBC1D3EA0A087X179 549 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 TEX13CA0A0J9YWL9 993 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 CD53P19397 219 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 RAB3BP20337 219 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 GABRA3P34903 492 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 SLC16A1P53985 500 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 TOR2AQ5JU69 321 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 PYHIN1Q6K0P9 492 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 KIRREL2Q6UWL6 708 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 NPSR1Q6W5P4 371 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 MTSS1LQ765P7 747 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 TPRA1Q86W33 373 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 CCDC28AQ8IWP9 274 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 RAB42Q8N4Z0 105 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 OR2T4Q8NH00 348 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 OR4K13Q8NH42 304 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 HYLS1Q96M11 299 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 DUSP22Q9NRW4 184 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 POT1Q9NUX5 634 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 ZNF222Q9UK12 451 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 KLHDC2Q9Y2U9 406 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 SPEF1Q9Y4P9 236 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 NPTNQ9Y639 398 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 TRAV1-2A0A0B4J238 106 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 SLC22A31A6NKX4 558 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 H0YGG7 62 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 PSMD9O00233 223 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 GNB5O14775 395 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 FMO6PO60774 539 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 CELA2BP08218 269 aaPredicted RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 POLR2CP19387 275 aaPredicted RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 CSRP1P21291 193 aaKnown RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 PAICSP22234 425 aaKnown RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 F8A1P23610 371 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 DPP4P27487 766 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 NAA10P41227 235 aaPredicted RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 ARF3P61204 181 aaPredicted RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 CDONQ4KMG0 1287 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 PRRT3Q5FWE3 981 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 RANBP3LQ86VV4 465 aaPredicted RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 OR8H3Q8N146 312 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 CA13Q8N1Q1 262 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 NPEPL1Q8NDH3 523 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 SRFBP1Q8NEF9 429 aaKnown RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 LGALS14Q8TCE9 139 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 GIMAP1Q8WWP7 306 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 SMIM19Q96E16 107 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 RBP7Q96R05 134 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 CERS4Q9HA82 394 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 EMC7Q9NPA0 242 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 MEIKINA0A087WXM9 373 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 LINC00862A6NCI5 91 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 OR6C68A6NDL8 312 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 TRABD2BA6NFA1 517 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 ANKRD61A6NGH8 418 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 SLC22A5O76082 557 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 ADH1BP00325 375 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 TPOP07202 933 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 SAGP10523 405 aaPredicted RBP9.05□□□□□ -0.96
SS18-203ENST00000415083 ACSL1P33121 698 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 RPS7P62081 194 aaKnown RBP9.05□□□□□ -0.96
SS18-203ENST00000415083 GPR18Q14330 331 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 PARM1Q6UWI2 310 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 OR52E2Q8NGJ4 325 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 HGDQ93099 445 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 ZFP3Q96NJ6 502 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 SYNDIG1Q9H7V2 258 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 KLHL1Q9NR64 748 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 INPP5EQ9NRR6 644 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 PIPOXQ9P0Z9 390 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 A0A087WV62 115 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 NPIPB9F8W1W9 429 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 NKX2-2O95096 273 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 RAF1P04049 648 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 GDI2P50395 445 aaKnown RBP9.05□□□□□ -0.96
SS18-203ENST00000415083 DMWDQ09019 674 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 GGTLC2Q14390 218 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 LINC01590Q5TEZ4 76 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 FAAP20Q6NZ36 180 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 ZNF767PQ75MW2 155 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 DACT3Q96B18 629 aaPredicted RBP9.05□□□□□ -0.96
SS18-203ENST00000415083 OR2M4Q96R27 311 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 LMF1Q96S06 567 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 MYADMQ96S97 322 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 NMNAT2Q9BZQ4 307 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 TCEAL2Q9H3H9 227 aaPredicted RBP9.05□□□□□ -0.96
SS18-203ENST00000415083 FAM60AQ9NP50 221 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 CA10Q9NS85 328 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 PCOLCE2Q9UKZ9 415 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 ENTPD2Q9Y5L3 495 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms