RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 ARMC8Q8IUR7 673 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 ABTB1Q969K4 478 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 UTP4Q969X6 686 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 ADOQ96SZ5 270 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 SLC38A1Q9H2H9 487 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 EVA1AQ9H8M9 152 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 BARX1Q9HBU1 254 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 DCAF13Q9NV06 445 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 SLC13A4Q9UKG4 626 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 BAG5Q9UL15 447 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 MKLN1Q9UL63 735 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 SLC6A5Q9Y345 797 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 GPC6Q9Y625 555 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 NOTCH1P46531 2555 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 ANKRD33BA6NCL7 494 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 AGAP5A6NIR3 686 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 H0YHG0 523 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 C16orf97H3BN30 126 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 OVOL3O00110 214 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 SCDO00767 359 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 KIAA0513O60268 411 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 TSPAN2O60636 221 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 TRIM3O75382 744 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 ACTL6AO96019 429 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 CRHP06850 196 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 THBS1P07996 1170 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 NGFRP08138 427 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 CHRM4P08173 479 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 FBXO45P0C2W1 286 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 NCK1P16333 377 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 IL7RP16871 459 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 TBXA2RP21731 343 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 AQP1P29972 269 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 CCKARP32238 428 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 ACVR1BP36896 505 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 VLDLRP98155 873 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 FUT5Q11128 374 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 MAPK11Q15759 364 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 TMEM249Q2WGJ8 235 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 FRRS1Q6ZNA5 592 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 CMIPQ8IY22 773 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 FAM13CQ8NE31 585 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 OR52P1PQ8NH57 321 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 GTPBP3Q969Y2 492 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 EFHD2Q96C19 240 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 DOCK7Q96N67 2140 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 UBQLN3Q9H347 655 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 ESRP2Q9H6T0 727 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 USP22Q9UPT9 525 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 LAMP3Q9UQV4 416 aa12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 CHCHD2Q9Y6H1 151 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF1-204ENST00000414781 DSPPQ9NZW4 1301 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 A0A1W2PNV4 684 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 SERINC4A6NH21 518 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 H0Y3Z8 333 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 TNFSF13O75888 250 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 MFN2O95140 757 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 SERPINA1P01009 418 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 GPIP06744 558 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 POU2F1P14859 743 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 CPN1P15169 458 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 PRKAR1BP31321 381 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 ACTR3P61158 418 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 SELENOWP63302 87 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 ZNF141Q15928 474 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 NTRK2Q16620 822 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 LIN52Q52LA3 116 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 EIPR1Q53HC9 387 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 CYBRD1Q53TN4 286 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 ZNF311Q5JNZ3 666 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 DCST1Q5T197 706 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 CBLL1Q75N03 491 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 EIF3MQ7L2H7 374 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 SPATA24Q86W54 205 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 GCNT2Q8N0V5 402 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 PROX1Q92786 737 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 ZC3HAV1LQ96H79 300 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 TUBA1CQ9BQE3 449 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 SDHAF3Q9NRP4 125 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 GMPR2Q9P2T1 348 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 PRDM4Q9UKN5 801 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 CNOT11Q9UKZ1 510 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 ABCG2Q9UNQ0 655 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 C15orf41Q9Y2V0 281 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 DTNAQ9Y4J8 743 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 WIF1Q9Y5W5 379 aa12.11□□□□□ -0.47
RAPGEF1-204ENST00000414781 SVEP1Q4LDE5 3571 aa12.1□□□□□ -0.47
RAPGEF1-204ENST00000414781 ANKRD65E5RJM6 399 aa12.1□□□□□ -0.47
RAPGEF1-204ENST00000414781 ADAM11O75078 769 aa12.1□□□□□ -0.47
RAPGEF1-204ENST00000414781 SMNDC1O75940 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
RAPGEF1-204ENST00000414781 SNX4O95219 450 aa12.1□□□□□ -0.47
RAPGEF1-204ENST00000414781 UTS2O95399 124 aa12.1□□□□□ -0.47
RAPGEF1-204ENST00000414781 ZNF682O95780 498 aa12.1□□□□□ -0.47
RAPGEF1-204ENST00000414781 IGKV1D-16P01601 117 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms