RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 EIF4E1BA6NMX2 242 aaKnown RBP6.02□□□□□ -1.45
VPS41-204ENST00000413141 A8MVM7 634 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 SHISA8B8ZZ34 492 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 FAM47E-STBD1D6RA91 191 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 LRRN3E7EW58 273 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 CDK2AP1O14519 115 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 KLK10O43240 276 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 HCN1O60741 890 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 NPIPB7O75200 414 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 WBP4O75554 376 aaKnown RBP6.02□□□□□ -1.45
VPS41-204ENST00000413141 SLC25A12O75746 678 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 WDPCPO95876 746 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 CH25HO95992 272 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 SMIM18P0DKX4 95 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 GABRB1P18505 474 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 CCNA2P20248 432 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 CD96P40200 585 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 APOBEC1P41238 236 aaKnown RBP6.02□□□□□ -1.45
VPS41-204ENST00000413141 SLC9A3P48764 834 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 DNASE1L1P49184 302 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 SMSP52788 366 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 GPR85P60893 370 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 CDC42P60953 191 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 RPS4XP62701 263 aaKnown RBP6.02□□□□□ -1.45
VPS41-204ENST00000413141 CDK5Q00535 292 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 TEKQ02763 1124 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 CDK5R2Q13319 367 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 MFAP5Q13361 173 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 FHL1Q13642 323 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 GINS1Q14691 196 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 OR1C1Q15619 314 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 PGGHGQ32M88 737 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 KCTD21Q4G0X4 260 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 CLEC12AQ5QGZ9 265 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 AGAP7PQ5VUJ5 663 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 TIGD3Q6B0B8 471 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 SPINK14Q6IE38 97 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 SMARCD3Q6STE5 483 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 C5orf46Q6UWT4 87 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 OAFQ86UD1 273 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 ADGRG3Q86Y34 549 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 CCDC103Q8IW40 242 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 SLC43A2Q8N370 569 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 MDS2Q8NDY4 140 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 OR2T33Q8NG76 320 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 OR52L1Q8NGH7 329 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 OR1J4Q8NGS1 313 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 OR4Q3Q8NH05 313 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 STK35Q8TDR2 534 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 LIPHQ8WWY8 451 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 HDAC2Q92769 488 aaKnown RBP6.02□□□□□ -1.45
VPS41-204ENST00000413141 OSTF1Q92882 214 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 ZNF566Q969W8 418 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 ZBTB8AQ96BR9 441 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 KTI12Q96EK9 354 aaPredicted RBP6.02□□□□□ -1.45
VPS41-204ENST00000413141 JSRP1Q96MG2 331 aaPredicted RBP6.02□□□□□ -1.45
VPS41-204ENST00000413141 AGAP4Q96P64 663 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 MOGAT1Q96PD6 335 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 SIGLEC12Q96PQ1 595 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 PTDSS2Q9BVG9 487 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 TSSK6Q9BXA6 273 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 PRRG3Q9BZD7 231 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 RNF32Q9H0A6 362 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 ZNF552Q9H707 407 aaPredicted RBP6.02□□□□□ -1.45
VPS41-204ENST00000413141 PTGES2Q9H7Z7 377 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 FKRPQ9H9S5 495 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 MCCC2Q9HCC0 563 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 TIMMDC1Q9NPL8 285 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 RASSF1Q9NS23 344 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 DEPPQ9NTK1 212 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 ZNF226Q9NYT6 803 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 IL20RAQ9UHF4 553 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 DKKL1Q9UK85 242 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 MYRFQ9Y2G1 1151 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 ZNF337Q9Y3M9 751 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 DCHS1Q96JQ0 3298 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 ZFHX4Q86UP3 3567 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 PTPRZ1P23471 2315 aaPredicted RBP6.02□□□□□ -1.45
VPS41-204ENST00000413141 PINLYPA6NC86 204 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 OR5H15A6NDH6 313 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 TRIM64A6NGJ6 449 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 MCIDASD6RGH6 385 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 SLC1A7O00341 560 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 BHLHE40O14503 412 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 EFSO43281 561 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 ZNF208O43345 1280 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 PRKYO43930 277 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 NME2P1O60361 137 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 MPZL2O60487 215 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 PTP4A3O75365 173 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 CBR3O75828 277 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 CEACAM4O75871 244 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 SMNDC1O75940 238 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS41-204ENST00000413141 NDUFB2O95178 105 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 RCBTB2O95199 551 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 AHSA1O95433 338 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 MT-ATP6P00846 226 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 BGLAPP02818 100 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 ASAH2BP0C7U1 165 aa6.01□□□□□ -1.45
VPS41-204ENST00000413141 ZNF17P17021 662 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms