RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 BOD1Q96IK1 185 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 GPR78Q96P69 363 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 MS4A4EQ96PG1 132 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF317Q96PQ6 595 aaPredicted RBP2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 DUX5Q96PT3 197 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 OSBPL9Q96SU4 736 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 STACQ99469 402 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 NAA11Q9BSU3 229 aaPredicted RBP2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 THUMPD3Q9BV44 507 aaKnown RBP2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF416Q9BWM5 594 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 BTBD2Q9BX70 525 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 C1QTNF5Q9BXJ0 243 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 EBPLQ9BY08 206 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 TMPRSS13Q9BYE2 586 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 ACPTQ9BZG2 426 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 TRIM31Q9BZY9 425 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 LAT2Q9GZY6 243 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 QRSL1Q9H0R6 528 aaKnown RBP2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 VPS11Q9H270 941 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 TPK1Q9H3S4 243 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 PIGUQ9H490 435 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF665Q9H7R5 613 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 CRLF2Q9HC73 371 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 DUSP22Q9NRW4 184 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 SLC7A10Q9NS82 523 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF275Q9NSD4 429 aaPredicted RBP2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 ACSS1Q9NUB1 689 aaPredicted RBP2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 OXSMQ9NWU1 459 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 SIRT5Q9NXA8 310 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 GIN1Q9NXP7 522 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 GRHL1Q9NZI5 618 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 CRNNQ9UBG3 495 aaPredicted RBP2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 RNF14Q9UBS8 474 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 REV1Q9UBZ9 1251 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 TESQ9UGI8 421 aaKnown RBP2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 CHRNA9Q9UGM1 479 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 MID2Q9UJV3 735 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 STK38LQ9Y2H1 464 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 HDGFL3Q9Y3E1 203 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 CMAHPQ9Y471 501 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 DTNAQ9Y4J8 743 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 MMP24Q9Y5R2 645 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 NOX1Q9Y5S8 564 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 FLVCR1Q9Y5Y0 555 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 TENM3Q9P273 2699 aa2.04□□□□□ -2.08
RNU4-53P-201ENST00000410828 PPIAL4EA0A075B759 164 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 A0A096LPE4 126 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ARPC4-TTLL3A0A0A6YYG9 625 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 PPIAL4CA0A0B4J2A2 164 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 IGHV2OR16-5A0A0B4J2B6 119 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 A0A1W2PPZ6 126 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SERTM1A2A2V5 107 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ESPNB1AK53 854 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF587BE7ETH6 402 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 PPIAL4DF5H284 164 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 C3orf80F5H4A9 247 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 NPIPB9F8W1W9 429 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 NR5A2O00482 541 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 WNT9BO14905 357 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 TP73O15350 636 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF208O43345 1280 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 DNAJA2O60884 412 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 STX11O75558 287 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SKAP2O75563 359 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 FOXH1O75593 365 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 RP2O75695 350 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 URI1O94763 535 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 LGI1O95970 557 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 FSHBP01225 129 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 IGKV3-15P01624 115 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 HMGN2P05204 90 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 CRYBA1P05813 215 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 GSNP06396 782 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ENO1P06733 434 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 KRT16P08779 473 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 IGFBP1P08833 259 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 PPIAL4FP0DN26 164 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 CBR1P16152 277 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 TCP1P17987 556 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 TSPAN8P19075 237 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 NR4A1P22736 598 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 OMGP23515 440 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 CALCRP30988 508 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 RYKP34925 604 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ARR3P36575 388 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 HSD17B3P37058 310 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 APOBEC1P41238 236 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 RAD52P43351 418 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 MTNR1AP48039 350 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 HTR6P50406 440 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SERPINB8P50452 374 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 RNF144AP50876 292 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ATP4BP51164 291 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 MAP2K6P52564 334 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SEC24CP53992 1094 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 PKNOX1P55347 436 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SH3BGRP55822 239 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 OR2B6P58173 313 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SELENOVP59797 346 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms