RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 IRS1P35568 1242 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 MRPS34P82930 218 aaKnown RBP7.85□□□□□ -1.15
SCN9A-203ENST00000409672 ILKQ13418 452 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 SNTB2Q13425 540 aaKnown RBP7.85□□□□□ -1.15
SCN9A-203ENST00000409672 POU4F3Q15319 338 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 OR8G1Q15617 311 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 ANKRD54Q6NXT1 300 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 B3GLCTQ6Y288 498 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 MARCH3Q86UD3 253 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 PATE1Q8WXA2 126 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF382Q96SR6 550 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 FAIMQ9NVQ4 179 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 KLRC4-KLRK1H3BQV0 150 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 RGRP47804 291 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 MAMDC4Q6UXC1 1216 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 CPOQ8IVL8 374 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF443Q9Y2A4 671 aaPredicted RBP7.85□□□□□ -1.15
SCN9A-203ENST00000409672 NPTNQ9Y639 398 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 SLC19A2O60779 497 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 C1orf105O95561 183 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 METTL25Q8N6Q8 603 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 OR14K1Q8NGZ2 314 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 PAQR8Q8TEZ7 354 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 DTD2Q96FN9 168 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 PLPPR2Q96GM1 343 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 ARHGEF17Q96PE2 2063 aaPredicted RBP7.85□□□□□ -1.15
SCN9A-203ENST00000409672 FBXO4Q9UKT5 387 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 SRPK3Q9UPE1 567 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 PPP1R3CQ9UQK1 317 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 A0A1B0GTW7 788 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 PTGESO14684 152 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 TOX4O94842 621 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF182P17025 639 aaPredicted RBP7.85□□□□□ -1.15
SCN9A-203ENST00000409672 HOXA11P31270 313 aaPredicted RBP7.85□□□□□ -1.15
SCN9A-203ENST00000409672 HOXD11P31277 338 aaPredicted RBP7.85□□□□□ -1.15
SCN9A-203ENST00000409672 PRPS1P60891 318 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 ADPRMQ3LIE5 342 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 OGFOD3Q6PK18 319 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 ADAMTS18Q8TE60 1221 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 ST6GALNAC4Q9H4F1 302 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 MYNNQ9NPC7 610 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 MTCH1Q9NZJ7 389 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 DOT1LQ8TEK3 1739 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 KLHL33A6NCF5 533 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 SEMG1P04279 462 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 TECRLQ5HYJ1 363 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 OTPQ5XKR4 325 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 ZC3H3Q8IXZ2 948 aaKnown RBP7.85□□□□□ -1.15
SCN9A-203ENST00000409672 TMEM239Q8WW34 195 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 CMSS1Q9BQ75 279 aaKnown RBP7.85□□□□□ -1.15
SCN9A-203ENST00000409672 DMAC2Q9NW81 257 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 A8MXE2 369 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF732B4DXR9 585 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 SNCAP37840 140 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 TAS2R20P59543 309 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 TFF2Q03403 129 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 TESK1Q15569 626 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 HNRNPA1L2Q32P51 320 aaKnown RBP7.85□□□□□ -1.15
SCN9A-203ENST00000409672 GARNL3Q5VVW2 1013 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 NME7Q9Y5B8 376 aa7.85□□□□□ -1.15
SCN9A-203ENST00000409672 H3BNX3 289 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ITGB2P05107 769 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 CTSCP53634 463 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 RNLSQ5VYX0 342 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 KCNIP4Q6PIL6 250 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 BTLAQ7Z6A9 289 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SULF2Q8IWU5 870 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF384Q8TF68 577 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SGK3Q96BR1 496 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 FEVQ99581 238 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 EMC6Q9BV81 110 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 GSTO2Q9H4Y5 243 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 UBTD1Q9HAC8 227 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 CRLF2Q9HC73 371 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 IL26Q9NPH9 171 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 NKX1-2Q9UD57 310 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SLC7A8Q9UHI5 535 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SQORQ9Y6N5 450 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 C12orf71A8MTZ7 269 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 RPL23AP62750 156 aaKnown RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 MC2RQ01718 297 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF92Q03936 586 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 POU4F2Q12837 409 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 GPR18Q14330 331 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SLC36A2Q495M3 483 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 MORN1Q5T089 497 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 Q6ZPB1 254 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 NLRC3Q7RTR2 1065 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 PDZD3Q86UT5 571 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 NMES1Q9C002 83 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 SELENOIQ9C0D9 397 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ELOVL3Q9HB03 270 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 RPS10P5Q9NQ39 176 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 MEPEQ9NQ76 525 aaPredicted RBP7.84□□□□□ -1.15
SCN9A-203ENST00000409672 KIF25Q9UIL4 384 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 BCL9LQ86UU0 1499 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 ECM29Q5VYK3 1845 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 KIR2DS5A0A0G2JLQ3 304 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 A0A0G2JNG1 304 aa7.84□□□□□ -1.15
SCN9A-203ENST00000409672 BOLA2-SMG1P6H3BVE0 249 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms