RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 FAM156AQ8NDB6 213 aa13.24□□□□□ -0.29
SUMO1-207ENST00000409498 LILRB4Q8NHJ6 448 aa13.24□□□□□ -0.29
SUMO1-207ENST00000409498 FAM162AQ96A26 154 aa13.24□□□□□ -0.29
SUMO1-207ENST00000409498 SLC47A1Q96FL8 570 aa13.24□□□□□ -0.29
SUMO1-207ENST00000409498 ARL5BQ96KC2 179 aa13.24□□□□□ -0.29
SUMO1-207ENST00000409498 PRR14Q9BWN1 585 aa13.24□□□□□ -0.29
SUMO1-207ENST00000409498 MUC13Q9H3R2 512 aa13.24□□□□□ -0.29
SUMO1-207ENST00000409498 COQ3Q9NZJ6 369 aa13.24□□□□□ -0.29
SUMO1-207ENST00000409498 RPS6KB2Q9UBS0 482 aa13.24□□□□□ -0.29
SUMO1-207ENST00000409498 RPS6KA6Q9UK32 745 aa13.24□□□□□ -0.29
SUMO1-207ENST00000409498 MCTS1Q9ULC4 181 aaKnown RBP13.24□□□□□ -0.29
SUMO1-207ENST00000409498 SH3GLB1Q9Y371 365 aa13.24□□□□□ -0.29
SUMO1-207ENST00000409498 PCNX1Q96RV3 2341 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 A0A1W2PNR3 127 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 CHP2O43745 196 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 GMNNO75496 209 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 LYPD3O95274 346 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 THY1P04216 161 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 CTSSP25774 331 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 CHRNB4P30926 498 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 DIO1P49895 249 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 CSNK2A1P68400 391 aaPredicted RBP13.23□□□□□ -0.29
SUMO1-207ENST00000409498 H3F3AP84243 136 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 EGR4Q05215 589 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 DNAL1Q4LDG9 190 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 PGM2L1Q6PCE3 622 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 TSPYL5Q86VY4 417 aaPredicted RBP13.23□□□□□ -0.29
SUMO1-207ENST00000409498 ATP6V1C2Q8NEY4 427 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 OR6S1Q8NH40 331 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 FNDC9Q8TBE3 224 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 ADAMTS16Q8TE57 1224 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 RNF128Q8TEB7 428 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 OR5B2Q96R09 309 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 BTBD10Q9BSF8 475 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 SRXN1Q9BYN0 137 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 OR11A1Q9GZK7 315 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 GP6Q9HCN6 339 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 GLRX2Q9NS18 164 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 ACTR3BQ9P1U1 418 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 SAMD4AQ9UPU9 718 aaKnown RBP13.23□□□□□ -0.29
SUMO1-207ENST00000409498 SNX13Q9Y5W8 968 aa13.23□□□□□ -0.29
SUMO1-207ENST00000409498 ZC3H12DA2A288 527 aaKnown RBP13.22□□□□□ -0.29
SUMO1-207ENST00000409498 TRAPPC13A5PLN9 417 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 SULT2B1O00204 365 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 ARPC2O15144 300 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 AQP8O94778 261 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 OR5F1O95221 314 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 SYNGR4O95473 234 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 THRBP10828 461 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 IMPDH2P12268 514 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 TCN1P20061 433 aaPredicted RBP13.22□□□□□ -0.29
SUMO1-207ENST00000409498 CDH12P55289 794 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 MYBPHQ13203 477 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 TRIM25Q14258 630 aaKnown RBP13.22□□□□□ -0.29
SUMO1-207ENST00000409498 IFI44LQ53G44 452 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 GTF2IRD2BQ6EKJ0 949 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 VTCN1Q7Z7D3 282 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 GTF2IRD2Q86UP8 949 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 SLC43A2Q8N370 569 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 OR10Q1Q8NGQ4 319 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 VANGL1Q8TAA9 524 aaPredicted RBP13.22□□□□□ -0.29
SUMO1-207ENST00000409498 GEMIN6Q8WXD5 167 aaKnown RBP13.22□□□□□ -0.29
SUMO1-207ENST00000409498 SDCCAG3Q96C92 435 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 TPD52L3Q96J77 140 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 MPP4Q96JB8 637 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 PSMG3-AS1Q96PY0 264 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 TMEM43Q9BTV4 400 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 ZNF426Q9BUY5 554 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 SFXN3Q9BWM7 321 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 AMBRA1Q9C0C7 1298 aa13.22□□□□□ -0.29
SUMO1-207ENST00000409498 USP9XQ93008 2570 aaPredicted RBP13.22□□□□□ -0.29
SUMO1-207ENST00000409498 MPDZO75970 2070 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 IGKV1D-42A0A075B6H8 117 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 ELOA3DA6NLF2 546 aaPredicted RBP13.21□□□□□ -0.29
SUMO1-207ENST00000409498 FTCDNL1E5RQL4 147 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 GYG2O15488 501 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 CYTIPO60759 359 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 TNFSF13O75888 250 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 CLDN14O95500 239 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 SEMG1P04279 462 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 TMIGD3P0DMS9 266 aaPredicted RBP13.21□□□□□ -0.29
SUMO1-207ENST00000409498 TFPIP10646 304 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 CCNA2P20248 432 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 TNFRSF1BP20333 461 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 ENPP1P22413 925 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 OPRM1P35372 400 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 MSX2P35548 267 aaPredicted RBP13.21□□□□□ -0.29
SUMO1-207ENST00000409498 OR1E2P47887 323 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 RASSF2P50749 326 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 SLC35A1P78382 337 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 PDK3Q15120 406 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 RNPS1Q15287 305 aaKnown RBP13.21□□□□□ -0.29
SUMO1-207ENST00000409498 CDSNQ15517 529 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 SLC25A35Q3KQZ1 300 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 ELOA3BQ3SY89 546 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 MTX3Q5HYI7 312 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 LCN8Q6JVE9 175 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 PLXDC2Q6UX71 529 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 P4HA3Q7Z4N8 544 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 CCDC71Q8IV32 467 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms