RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ATP1B3P54709 279 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 FOXK1P85037 733 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 FLI1Q01543 452 aaPredicted RBP12.11□□□□□ -0.47
RNF43-201ENST00000407977 TEKQ02763 1124 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 MBTPS1Q14703 1052 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 ADPRMQ3LIE5 342 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 C5orf46Q6UWT4 87 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 S100A7AQ86SG5 101 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 CADM3Q8N126 398 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 PELI3Q8N2H9 469 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 PLPP5Q8NEB5 264 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 ABHD4Q8TB40 342 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 SENP5Q96HI0 755 aaPredicted RBP12.11□□□□□ -0.47
RNF43-201ENST00000407977 RARRES3Q9UL19 164 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 WIF1Q9Y5W5 379 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 MED1Q15648 1581 aaPredicted RBP12.11□□□□□ -0.47
RNF43-201ENST00000407977 TRBV4-1A0A0J9YWV2 114 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 A0A0U1RQK1 487 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 ZNF888P0CJ79 500 aaPredicted RBP12.11□□□□□ -0.47
RNF43-201ENST00000407977 SNRPBP14678 240 aaKnown RBP12.11□□□□□ -0.47
RNF43-201ENST00000407977 RABIFP47224 123 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 HHEXQ03014 270 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 CD300LGQ6UXG3 332 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 GPR155Q7Z3F1 870 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 TRAPPC6BQ86SZ2 158 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 ARRDC2Q8TBH0 407 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 THAP3Q8WTV1 239 aaPredicted RBP12.11□□□□□ -0.47
RNF43-201ENST00000407977 TAAR8Q969N4 342 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 EGLN2Q96KS0 407 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 ELOVL3Q9HB03 270 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 CLDND1Q9NY35 253 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 PARP4Q9UKK3 1724 aaKnown RBP12.11□□□□□ -0.47
RNF43-201ENST00000407977 AIPO00170 330 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 ADAM12O43184 909 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 ITGB2P05107 769 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 PIPP12273 146 aaPredicted RBP12.11□□□□□ -0.47
RNF43-201ENST00000407977 CCR7P32248 378 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 SLC22A6Q4U2R8 563 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 FAM69BQ5VUD6 431 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 SLX4IPQ5VYV7 408 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 TIGD3Q6B0B8 471 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 TECPR1Q7Z6L1 1165 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 LFNGQ8NES3 379 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 DNAJA3Q96EY1 480 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 CDH20Q9HBT6 801 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 ACKR4Q9NPB9 350 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 ROBO1Q9Y6N7 1651 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 COL2A1P02458 1487 aaPredicted RBP12.11□□□□□ -0.47
RNF43-201ENST00000407977 SLC16A7O60669 478 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 ATP1B1P05026 303 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 TRIM23P36406 574 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 ZNF266Q14584 549 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 BAK1Q16611 211 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 MBOAT2Q6ZWT7 520 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 SSX9Q7RTT3 188 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 CHST14Q8NCH0 376 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 OR4D6Q8NGJ1 314 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 LGALS14Q8TCE9 139 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 GHSRQ92847 366 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 SERTAD4Q9NUC0 356 aa12.11□□□□□ -0.47
RNF43-201ENST00000407977 MYH11P35749 1972 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 TRAV27A0A087WT01 109 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 PPP1R2P9O14990 202 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 ITGB7P26010 798 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 POLR2IP36954 125 aaKnown RBP12.1□□□□□ -0.47
RNF43-201ENST00000407977 MZT1Q08AG7 82 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 DUSP6Q16828 381 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 EXOSC6Q5RKV6 272 aaKnown RBP12.1□□□□□ -0.47
RNF43-201ENST00000407977 C18orf63Q68DL7 685 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 KCTD11Q693B1 232 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 KDM4DQ6B0I6 523 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 IL20RBQ6UXL0 311 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 SIAH3Q8IW03 269 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 CPXM2Q8N436 756 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 FOXJ1Q92949 421 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 OCSTAMPQ9BR26 566 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 CUTCQ9NTM9 273 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 KLF15Q9UIH9 416 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 F5H5K5 113 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 CPNE6O95741 557 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 DCAF7P61962 342 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 KCNJ10P78508 379 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 SYPL1Q16563 259 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 BEX5Q5H9J7 111 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 TANGO2Q6ICL3 276 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 FAM180BQ6P0A1 224 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 MKXQ8IYA7 352 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 L3MBTL4Q8NA19 623 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 PKMYT1Q99640 499 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 TXN2Q99757 166 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 NIPSNAP3BQ9BS92 247 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 PAPOLGQ9BWT3 736 aaKnown RBP12.1□□□□□ -0.47
RNF43-201ENST00000407977 OR52A5Q9H2C5 316 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 SFXN1Q9H9B4 322 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 UBQLN4Q9NRR5 601 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 ASIC5Q9NY37 505 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 PUS1Q9Y606 427 aaKnown RBP eCLIP12.1□□□□□ -0.47
RNF43-201ENST00000407977 UBR1Q8IWV7 1749 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 A0A0J9YY10 115 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 LRIT2A6NDA9 550 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms