RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TFP02787 698 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 OR2T7P0C7T2 308 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 PPM1FP49593 454 aaPredicted RBP15.45■□□□□ 0.06
NUP50-203ENST00000407019 HSD17B7P56937 341 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 LGALS3BPQ08380 585 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.45■□□□□ 0.06
NUP50-203ENST00000407019 TP53I3Q53FA7 332 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 ACSM3Q53FZ2 586 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 DPY19L2P2Q6ZN68 376 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 SYS1Q8N2H4 156 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 RFLNBQ8N5W9 214 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 LRRC17Q8N6Y2 441 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 ZNF615Q8N8J6 731 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 OR4M2Q8NGB6 313 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 OR2T27Q8NH04 317 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 RLN3Q8WXF3 142 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 GHSRQ92847 366 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 TTTY10Q9BZA0 68 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 TMEM165Q9HC07 324 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 KLHL1Q9NR64 748 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 TMEM131Q92545 1883 aa15.45■□□□□ 0.06
NUP50-203ENST00000407019 A0A0G2JK05 382 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 A0A1W2PRG6 482 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 LRRN3E7EW58 273 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 RGS13O14921 159 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 OR7A10O76100 309 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 SERPINA3P01011 423 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 EIF4EP06730 217 aaKnown RBP15.44■□□□□ 0.06
NUP50-203ENST00000407019 FAM157BP0CG42 384 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 HLA-DMAP28067 261 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 RBMS1P29558 406 aaKnown RBP15.44■□□□□ 0.06
NUP50-203ENST00000407019 GABRA4P48169 554 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 GBX2P52951 348 aaPredicted RBP15.44■□□□□ 0.06
NUP50-203ENST00000407019 ZNF57Q68EA5 555 aaPredicted RBP15.44■□□□□ 0.06
NUP50-203ENST00000407019 UTS2BQ765I0 119 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 GLCCI1Q86VQ1 547 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 SLC35F2Q8IXU6 374 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 ZNF440Q8IYI8 595 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 FAM160A2Q8N612 972 aaPredicted RBP15.44■□□□□ 0.06
NUP50-203ENST00000407019 SAMD12Q8N8I0 201 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 TEX19Q8NA77 164 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 OR4M1Q8NGD0 313 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 SLC38A3Q99624 504 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 PELOQ9BRX2 385 aaKnown RBP15.44■□□□□ 0.06
NUP50-203ENST00000407019 LRRN3Q9H3W5 708 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 UCK1Q9HA47 277 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 PRODH2Q9UF12 536 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 ZNF337Q9Y3M9 751 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 ADAM18Q9Y3Q7 739 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 LILRA5A6NI73 299 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 AGRPO00253 132 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 OGG1O15527 345 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 RCVRNP35243 200 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 NAA10P41227 235 aaPredicted RBP15.44■□□□□ 0.06
NUP50-203ENST00000407019 HCCSP53701 268 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 MRPS15P82914 257 aaKnown RBP15.44■□□□□ 0.06
NUP50-203ENST00000407019 PON3Q15166 354 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 TATDN3Q17R31 274 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 GKN2Q86XP6 184 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 OR51L1Q8NGJ5 315 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 OR51Q1Q8NH59 317 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 LMX1AQ8TE12 382 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 C3orf49Q96BT1 292 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.44■□□□□ 0.06
NUP50-203ENST00000407019 HDHD2Q9H0R4 259 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 SOHLH2Q9NX45 425 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 NLKQ9UBE8 527 aa15.44■□□□□ 0.06
NUP50-203ENST00000407019 CHURC1-FNTBB4DL54 471 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 HYAL3O43820 417 aaPredicted RBP15.43■□□□□ 0.06
NUP50-203ENST00000407019 CLPSP04118 112 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 NPR2P20594 1047 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 GALNSP34059 522 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 FNTBP49356 437 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 CLDN20P56880 219 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 SERTAD2Q14140 314 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 CDK5R1Q15078 307 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 PAMR1Q6UXH9 720 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 SYT13Q7L8C5 426 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 TSTD1Q8NFU3 115 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 OR13C5Q8NGS8 318 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 TRMT10AQ8TBZ6 339 aaKnown RBP15.43■□□□□ 0.06
NUP50-203ENST00000407019 SMIM19Q96E16 107 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 PELI1Q96FA3 418 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 WACQ9BTA9 647 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 SLC19A3Q9BZV2 496 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 C2orf42Q9NWW7 574 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 CLCA3PQ9Y6N3 262 aa15.43■□□□□ 0.06
NUP50-203ENST00000407019 FAM172BPA6NC97 362 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 NME1P15531 152 aaKnown RBP15.42■□□□□ 0.06
NUP50-203ENST00000407019 RAB3BP20337 219 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 GDI2P50395 445 aaKnown RBP15.42■□□□□ 0.06
NUP50-203ENST00000407019 NDUFA5Q16718 116 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 CDONQ4KMG0 1287 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 KLHL26Q53HC5 615 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 OR14A16Q8NHC5 309 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 TGM7Q96PF1 710 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 NMNAT3Q96T66 252 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 TPSD1Q9BZJ3 242 aa15.42■□□□□ 0.06
NUP50-203ENST00000407019 RANGRFQ9HD47 186 aaPredicted RBP15.42■□□□□ 0.06
NUP50-203ENST00000407019 TMEM184BQ9Y519 407 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms