RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 HMGN2P46Q86SG4 172 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CDK20Q8IZL9 346 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CLEC4FQ8N1N0 589 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SVOPLQ8N434 492 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZNF540Q8NDQ6 660 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 FAM71CQ8NEG0 241 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PSMA8Q8TAA3 256 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PIGXQ8TBF5 258 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZG16BQ96DA0 208 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 BOD1Q96IK1 185 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZNF385AQ96PM9 386 aaKnown RBP10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 RACGAP1Q9H0H5 632 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 LPAR2Q9HBW0 351 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 C1orf109Q9NX04 203 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CRNNQ9UBG3 495 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PYCARDQ9ULZ3 195 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 STK38LQ9Y2H1 464 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PCDHGB1Q9Y5G3 927 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZC3H12DA2A288 527 aaKnown RBP10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CCDC151A5D8V7 595 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZNF503-AS2A6NEH8 195 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CLDN24A6NM45 220 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 hCG_2039718K7EN88 272 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 GPR171O14626 319 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 LGI1O95970 557 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 IGLV1-44P01699 117 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 BCKDHAP12694 445 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 DDX5P17844 614 aaKnown RBP10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CCNA2P20248 432 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CCT3P49368 545 aaKnown RBP10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 OR2B6P58173 313 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TP53BP2Q13625 1128 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 GPR68Q15743 365 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TBRG1Q3YBR2 411 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ELFN2Q5R3F8 820 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 EMBQ6PCB8 327 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SLC22A9Q8IVM8 553 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 OR5AK3PQ8NH89 298 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CLDND2Q8NHS1 167 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ADAMTS15Q8TE58 950 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 MZB1Q8WU39 189 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 NMUR2Q9GZQ4 415 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 RRAGDQ9NQL2 400 aaPredicted RBP10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SERINC1Q9NRX5 453 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 HIF1ANQ9NWT6 349 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 UPB1Q9UBR1 384 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CHRNA9Q9UGM1 479 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ATP6V1HQ9UI12 483 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 MKLN1Q9UL63 735 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 RYR3Q15413 4870 aa10.28□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TMEM72A0PK05 275 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 LSM1O15116 133 aaKnown RBP10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 PDE5AO76074 875 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 C6orf47O95873 294 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 C1QCP02747 245 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 IFNGR1P15260 489 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 RPL38P63173 70 aaKnown RBP10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 FUT5Q11128 374 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 AP1ARQ63HQ0 302 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ZNF572Q7Z3I7 529 aaPredicted RBP10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ZDHHC22Q8N966 263 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 OR1K1Q8NGR3 316 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 UBASH3BQ8TF42 649 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 SLC25A43Q8WUT9 341 aaPredicted RBP10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 BCL2L2Q92843 193 aaPredicted RBP10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 TMEM186Q96B77 213 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 METTL2AQ96IZ6 378 aaKnown RBP10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 KATNB1Q9BVA0 655 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 RAB1BQ9H0U4 201 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 TPK1Q9H3S4 243 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 NARFLQ9H6Q4 476 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ZNF696Q9H7X3 374 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 PCDHB10Q9UN67 800 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 HDGFL3Q9Y3E1 203 aa10.27□□□□□ -0.77
SPTLC1P3-201ENST00000403408 LOC105371242A0A075B767 164 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 SH3PXD2BA1X283 911 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 PRAMEF27A3QJZ7 478 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 B4DSR2 109 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 AP3D1O14617 1153 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 SCAMP2O15127 329 aaKnown RBP10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 DNPH1O43598 174 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 SKAP2O75563 359 aaPredicted RBP10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 WNT11O96014 354 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 CSTAP01040 98 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 LINC00032P0C843 101 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 UROSP10746 265 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 COL8A2P25067 703 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 RYKP34925 604 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 APOBEC1P41238 236 aaKnown RBP10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 MAGEA8P43361 318 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 P2RY4P51582 365 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 LMO4P61968 165 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ADRM1Q16186 407 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 ZYG11AQ6WRX3 759 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 USP43Q70EL4 1123 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 GLCCI1Q86VQ1 547 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 KRTCAP2Q8N6L1 136 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 WDR60Q8WVS4 1066 aa10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 NEU4Q8WWR8 484 aaPredicted RBP10.26□□□□□ -0.77
SPTLC1P3-201ENST00000403408 TMEM45BQ96B21 275 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms