RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 NPAS1Q99742 590 aa15.74■□□□□ 0.11
SMIM11A-202ENST00000399295 KLHL28Q9NXS3 571 aa15.74■□□□□ 0.11
SMIM11A-202ENST00000399295 SLC13A4Q9UKG4 626 aa15.74■□□□□ 0.11
SMIM11A-202ENST00000399295 SLC9A8Q9Y2E8 581 aa15.74■□□□□ 0.11
SMIM11A-202ENST00000399295 MBD3L4A6NDZ8 208 aaPredicted RBP15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 MBD3L3A6NE82 208 aaPredicted RBP15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 MBD3L5A6NJ08 208 aaPredicted RBP15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 CLDN24A6NM45 220 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 IL2RAP01589 272 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 DBIP07108 87 aaKnown RBP15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 IL7RP16871 459 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 ADH6P28332 368 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 CEACAM8P31997 349 aaPredicted RBP15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 ARHGDIAP52565 204 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 CLDN15P56746 228 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 CLDN20P56880 219 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 VLDLRP98155 873 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 FOXF1Q12946 379 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 LARS2Q15031 903 aaKnown RBP15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 QPRTQ15274 297 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 ZSWIM7Q19AV6 140 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 ZNF311Q5JNZ3 666 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 HIST2H2BCQ6DN03 193 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 ADGRE4PQ86SQ3 457 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 FAM71CQ8NEG0 241 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 OR52P1PQ8NH57 321 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 MBD3L2Q8NHZ7 208 aaPredicted RBP15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 UCN2Q96RP3 112 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 TACO1Q9BSH4 297 aaKnown RBP15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 OSBPL10Q9BXB5 764 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 ARMC7Q9H6L4 198 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 SH3GLB1Q9Y371 365 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 FAM32AQ9Y421 112 aaKnown RBP15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 PCNX3Q9H6A9 2034 aa15.73■□□□□ 0.11
SMIM11A-202ENST00000399295 FAM90A27PA6NNH2 459 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 ADAMDEC1O15204 470 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 BCAS1O75363 584 aaPredicted RBP15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 LGI1O95970 557 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 PRKCAP17252 672 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 PGCP20142 388 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 RPS4Y1P22090 263 aaKnown RBP15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 RPS3AP61247 264 aaKnown RBP15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 RAC1P63000 192 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 LRRC36Q1X8D7 754 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 SP5Q6BEB4 398 aaPredicted RBP15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 ZBTB49Q6ZSB9 765 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 CYP4Z1Q86W10 505 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 CMIPQ8IY22 773 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 C9orf106Q8NAJ2 232 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 NAXEQ8NCW5 288 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 GPR32P1Q8NGA4 272 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 CNOT9Q92600 299 aaKnown RBP15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 WNT2BQ93097 391 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 MRGPRX4Q96LA9 322 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 ZNF300Q96RE9 604 aaPredicted RBP15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 ZNF184Q99676 751 aaPredicted RBP15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 TM9SF2Q99805 663 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 UCK2Q9BZX2 261 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 TMEM185BQ9H7F4 350 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 NTN4Q9HB63 628 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 KCNJ16Q9NPI9 418 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 EXOSC3Q9NQT5 275 aaKnown RBP15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 CLCF1Q9UBD9 225 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 ENPP4Q9Y6X5 453 aa15.72■□□□□ 0.11
SMIM11A-202ENST00000399295 ARHGAP21Q5T5U3 1957 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 hCG_2039718K7EN88 272 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 EIF1AYO14602 144 aaKnown RBP15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 OPN1LWP04000 364 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 NID1P14543 1247 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 ZNF23P17027 643 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 RHCEP18577 417 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 ELK4P28324 431 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 GRNP28799 593 aaKnown RBP15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 RYKP34925 604 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 HSPA13P48723 471 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 IQCCQ4KMZ1 466 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 LIN52Q52LA3 116 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 SLC25A53Q5H9E4 307 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 PPP4R4Q6NUP7 873 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 PLXDC2Q6UX71 529 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 IZUMO2Q6UXV1 221 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 GGNQ86UU5 652 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 HIPK1Q86Z02 1210 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 ZDHHC13Q8IUH4 622 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 GRAMD2AQ8IUY3 354 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 LIX1LQ8IVB5 337 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 OR5K1Q8NHB7 308 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 DNAJC9Q8WXX5 260 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 TMEM234Q8WY98 164 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 ZNF524Q96C55 264 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 NRBF2Q96F24 287 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 CIB1Q99828 191 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 REEP1Q9H902 201 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 NDUFAF4Q9P032 175 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 OAZ3Q9UMX2 235 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 ZNF443Q9Y2A4 671 aaPredicted RBP15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 LRRC42Q9Y546 428 aa15.71■□□□□ 0.11
SMIM11A-202ENST00000399295 CACNA1DQ01668 2161 aa15.7■□□□□ 0.1
SMIM11A-202ENST00000399295 NKX2-6A6NCS4 301 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms