RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 H3BNC9 293 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 UBL3O95164 117 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 CHRNB1P11230 501 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 CDK4P11802 303 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TNFSF8P32971 234 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 AQP2P41181 271 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 CAV2P51636 162 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 DUSP6Q16828 381 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ZNF789Q5FWF6 425 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 C19orf47Q8N9M1 422 aaKnown RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 MKRN2Q9H000 416 aaKnown RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 STEAP1Q9UHE8 339 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 CAMK2AQ9UQM7 478 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 PCDHGA6Q9Y5G7 932 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ARGFXA6NJG6 315 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TMEM200CA6NKL6 621 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 SHOXO15266 292 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 NUDT21O43809 227 aaKnown RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 FZD7O75084 574 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ERVK-25P63136 954 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ZNF92Q03936 586 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 SPCS2Q15005 226 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 P2RY14Q15391 338 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 RBMS3Q6XE24 437 aaKnown RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 MKXQ8IYA7 352 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TMEM40Q8WWA1 233 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 GIMAP1Q8WWP7 306 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TOX2Q96NM4 488 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 KIR3DX1Q9H7L2 352 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 RPS10P5Q9NQ39 176 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 CA14Q9ULX7 337 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TRBV11-1A0A0K0K1C0 115 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 CXorf51AA0A1B0GTR3 108 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 AIFM1O95831 613 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 MT-ATP6P00846 226 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 KNG1P01042 644 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 F3P13726 295 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TNFRSF1BP20333 461 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ZNF684Q5T5D7 378 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 RETREG3Q86VR2 466 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TMEM185AQ8NFB2 350 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 OR13F1Q8NGS4 319 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ZNF480Q8WV37 535 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ANKRD9Q96BM1 317 aaPredicted RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 FAM71F1Q96KD3 344 aaPredicted RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 CNTNAP3Q9BZ76 1288 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 OR52A5Q9H2C5 316 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 LYRM4Q9HD34 91 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 CD300AQ9UGN4 299 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 GJD2Q9UKL4 321 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 A0A087WUU8 490 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 LOC105369274A0A096LPK9 316 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ARPC4-TTLL3A0A0A6YYG9 625 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TNFRSF10AO00220 468 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ZNF264O43296 627 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 KCNK2O95069 426 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 PLATP00750 562 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 EIF1P41567 113 aaKnown RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 CASP3P42574 277 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 VASPP50552 380 aaPredicted RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 WNT7BP56706 349 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 BTG1P62324 171 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 GRB2P62993 217 aaKnown RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 PRDX1Q06830 199 aaKnown RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 C1orf61Q13536 156 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 LYSMD4Q5XG99 296 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 OVCH1Q7RTY7 1134 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 OR4N4Q8N0Y3 316 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TMEM102Q8N9M5 508 aaPredicted RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 OR6F1Q8NGZ6 308 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 NANPQ8TBE9 248 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ZFPM2Q8WW38 1151 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TMIGD2Q96BF3 282 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 SSX3Q99909 188 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 SSC5DA1L4H1 1573 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TRDV1A0A1B0GX56 115 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 OR6C76A6NM76 312 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 TSTD3H0UI37 97 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 SUSD5O60279 629 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 CACNG3O60359 315 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 MT-ND4P03905 459 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ALDOCP09972 364 aaKnown RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 KIAA1024LP59773 190 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 PLA2G7Q13093 441 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 RAB6CQ53S08 254 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 IER5LQ5T953 404 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 FCRLBQ6BAA4 426 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 BRICD5Q6PL45 260 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 VRK2Q86Y07 508 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 SLAMF9Q96A28 289 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 RAB6CQ9H0N0 254 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 ISYNA1Q9NPH2 558 aa7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 FAM212BQ9NTI7 297 aaPredicted RBP7.8□□□□□ -1.16
SPTLC3-201ENST00000399002 MPPED1O15442 326 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 FURINP09958 794 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 SELEP16581 610 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 MSX1P28360 303 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 RFX2P48378 723 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 DAPP51397 102 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 FXYD4P59646 89 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms