RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 EPS8Q12929 822 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 LARS2Q15031 903 aaKnown RBP11.88□□□□□ -0.51
VCX3A-202ENST00000398729 MAPK11Q15759 364 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 ZSWIM7Q19AV6 140 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 LIN52Q52LA3 116 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 ABLIM2Q6H8Q1 611 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 ZNF704Q6ZNC4 412 aaPredicted RBP11.88□□□□□ -0.51
VCX3A-202ENST00000398729 P3H2Q8IVL5 708 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 LRRC75A-AS1Q8N1F1 130 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 GOLGA6L1Q8N7Z2 621 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 PIGXQ8TBF5 258 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 SLC38A5Q8WUX1 472 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 GTF2H4Q92759 462 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 DNAJA3Q96EY1 480 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 AURKBQ96GD4 344 aaPredicted RBP11.88□□□□□ -0.51
VCX3A-202ENST00000398729 POTEKPQ9BYX7 375 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 RAD21L1Q9H4I0 556 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 SLCO1B3Q9NPD5 702 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 RLIMQ9NVW2 624 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 TMEM181Q9P2C4 612 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 PRSS50Q9UI38 385 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 OSGIN1Q9UJX0 560 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 PRDM4Q9UKN5 801 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 ZNF232Q9UNY5 417 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 TRAPPC4Q9Y296 219 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 TMED7Q9Y3B3 224 aa11.88□□□□□ -0.51
VCX3A-202ENST00000398729 RAI1Q7Z5J4 1906 aaPredicted RBP11.88□□□□□ -0.51
VCX3A-202ENST00000398729 IGKV3D-15A0A087WSY6 115 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 A0A0G2JPF8 293 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 TMEM72A0PK05 275 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 CDHR4A6H8M9 788 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 ZNF716A6NP11 495 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 HNRNPCL2B2RXH8 293 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 HNRNPCL3B7ZW38 293 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 GPR171O14626 319 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 HNRNPCL1O60812 293 aaKnown RBP11.87□□□□□ -0.51
VCX3A-202ENST00000398729 THBS1P07996 1170 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 HNRNPCL4P0DMR1 293 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 IDH3AP50213 366 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 SLC35A1P78382 337 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 CAPRIN1Q14444 709 aaKnown RBP11.87□□□□□ -0.51
VCX3A-202ENST00000398729 TAB1Q15750 504 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 TTMPQ5BVD1 217 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 SLC2A7Q6PXP3 512 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 ZNF836Q6ZNA1 936 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 BHLHA15Q7RTS1 189 aaPredicted RBP11.87□□□□□ -0.51
VCX3A-202ENST00000398729 VRK2Q86Y07 508 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 SPATA3Q8NHX4 192 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 EBF4Q9BQW3 602 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 CCDC28BQ9BUN5 200 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 PAIP1Q9H074 479 aaKnown RBP11.87□□□□□ -0.51
VCX3A-202ENST00000398729 ARMC7Q9H6L4 198 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 ESRP2Q9H6T0 727 aaKnown RBP11.87□□□□□ -0.51
VCX3A-202ENST00000398729 ZNF443Q9Y2A4 671 aaPredicted RBP11.87□□□□□ -0.51
VCX3A-202ENST00000398729 NOSIPQ9Y314 301 aaKnown RBP11.87□□□□□ -0.51
VCX3A-202ENST00000398729 PCDHB14Q9Y5E9 798 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 DSCAMO60469 2012 aa11.87□□□□□ -0.51
VCX3A-202ENST00000398729 A0A096LPI6 279 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 CLIC1O00299 241 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 HS3ST1O14792 307 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 EIF1BO60739 113 aaKnown RBP11.86□□□□□ -0.51
VCX3A-202ENST00000398729 LYZL6O75951 148 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 PLAUP00749 431 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 IGHV1-2P23083 117 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 CXCR1P25024 350 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 SLC16A1P53985 500 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 COPZ1P61923 177 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 H3F3AP84243 136 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 FADDQ13158 208 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 RGNQ15493 299 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 RPS26P11Q5JNZ5 115 aaPredicted RBP11.86□□□□□ -0.51
VCX3A-202ENST00000398729 Q5PR19 223 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 RNF220Q5VTB9 566 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 FBXW9Q5XUX1 488 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.86□□□□□ -0.51
VCX3A-202ENST00000398729 HDXQ7Z353 690 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 CCDC103Q8IW40 242 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 UBE2J2Q8N2K1 259 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 APH1AQ96BI3 265 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 TMEM19Q96HH6 336 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 COX4I2Q96KJ9 171 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 TMEM204Q9BSN7 226 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 NAA11Q9BSU3 229 aaPredicted RBP11.86□□□□□ -0.51
VCX3A-202ENST00000398729 ADAM19Q9H013 955 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 ARGLU1Q9NWB6 273 aaPredicted RBP11.86□□□□□ -0.51
VCX3A-202ENST00000398729 CCDC167Q9P0B6 97 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 ADAM21Q9UKJ8 722 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 IFT52Q9Y366 437 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 RNF115Q9Y4L5 304 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 CUBNO60494 3623 aa11.86□□□□□ -0.51
VCX3A-202ENST00000398729 HMGB1P1B2RPK0 211 aaPredicted RBP11.85□□□□□ -0.51
VCX3A-202ENST00000398729 C5orf58C9J3I9 102 aa11.85□□□□□ -0.51
VCX3A-202ENST00000398729 NR5A2O00482 541 aa11.85□□□□□ -0.51
VCX3A-202ENST00000398729 MRPL33O75394 65 aaKnown RBP11.85□□□□□ -0.51
VCX3A-202ENST00000398729 CD3EP07766 207 aa11.85□□□□□ -0.51
VCX3A-202ENST00000398729 GKN3PP0CG01 181 aa11.85□□□□□ -0.51
VCX3A-202ENST00000398729 IMPDH2P12268 514 aa11.85□□□□□ -0.51
VCX3A-202ENST00000398729 GGT1P19440 569 aa11.85□□□□□ -0.51
VCX3A-202ENST00000398729 COX5AP20674 150 aa11.85□□□□□ -0.51
VCX3A-202ENST00000398729 EDNRAP25101 427 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms