RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 PRR14Q9BWN1 585 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 SLC19A3Q9BZV2 496 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 ERVK-18Q9QC07 812 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 PRDM4Q9UKN5 801 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 PCDHGA10Q9Y5H3 936 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 TCRBV16S1A1N1A0A5B0 115 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 CDHR4A6H8M9 788 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 FAM166BA8MTA8 275 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 H0YC42 278 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 CCRL2O00421 344 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 IDH3BO43837 385 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 MRPS14O60783 128 aaKnown RBP7.6□□□□□ -1.19
PTPRD-204ENST00000397606 CBX7O95931 251 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 MT-ND2P03891 347 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 F13BP05160 661 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 SLC10A1Q14973 349 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 MAD2L1BPQ15013 274 aaPredicted RBP7.6□□□□□ -1.19
PTPRD-204ENST00000397606 ACER2Q5QJU3 275 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 HBMQ6B0K9 141 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 B3GNT8Q7Z7M8 397 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 IZUMO1Q8IYV9 350 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 LNX2Q8N448 690 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 TMEM163Q8TC26 289 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 NRG4Q8WWG1 115 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 MRGPRX4Q96LA9 322 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 KATNB1Q9BVA0 655 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 TMED9Q9BVK6 235 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 ENKD1Q9H0I2 346 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 SIRT3Q9NTG7 399 aaPredicted RBP7.6□□□□□ -1.19
PTPRD-204ENST00000397606 PCDHGA6Q9Y5G7 932 aa7.6□□□□□ -1.19
PTPRD-204ENST00000397606 TRAV17A0A0B4J275 112 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 DPPA5A6NC42 116 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 SLC43A1O75387 559 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 OR7A10O76100 309 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 AQP2P41181 271 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF829Q3KNS6 432 aaPredicted RBP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 PRSS48Q7RTY5 328 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 ARHGAP22Q7Z5H3 698 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 ZBTB44Q8NCP5 570 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 OR4N2Q8NGD1 307 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 OR51L1Q8NGJ5 315 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 TTTY10Q9BZA0 68 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 ULBP2Q9BZM5 246 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 SEMA4CQ9C0C4 833 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 ACER3Q9NUN7 267 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 SLCO1B1Q9Y6L6 691 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 LTBP2Q14767 1821 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 SLC16A7O60669 478 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 VAMP5O95183 116 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 GRK5P34947 590 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 DAPP51397 102 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 CXCR4P61073 352 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 FGFBP1Q14512 234 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 EBPQ15125 230 aaKnown RBP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 NADK2Q4G0N4 442 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 LRFN4Q6PJG9 635 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 DPY19L2P2Q6ZN68 376 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 CNEP1R1Q8N9A8 125 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 PAPD5Q8NDF8 572 aaKnown RBP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 EGLN3Q9H6Z9 239 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF696Q9H7X3 374 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 EMC9Q9Y3B6 208 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 KCNE3Q9Y6H6 103 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 PIKFYVEQ9Y2I7 2098 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 CD14P08571 375 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 GRPRP30550 384 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 RORCP51449 518 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 RPS18P62269 152 aaKnown RBP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 RAB40BQ12829 278 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 FAM189A2Q15884 450 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 AP1ARQ63HQ0 302 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 PGBD2Q6P3X8 592 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 H1FNTQ75WM6 255 aaPredicted RBP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 AAED1Q7RTV5 226 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 NKAIN4Q8IVV8 208 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 CCDC103Q8IW40 242 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 UCN3Q969E3 161 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 ZMYND19Q96E35 227 aaPredicted RBP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 MGLLQ99685 303 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 COQ7Q99807 217 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 PRO3102Q9H379 93 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 PAQR5Q9NXK6 330 aaPredicted RBP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 RNF6Q9Y252 685 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 CAB39Q9Y376 341 aaPredicted RBP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 RIF1Q5UIP0 2472 aaKnown RBP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 A0A087WUU8 490 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 DLL1O00548 723 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 TPD52L2O43399 206 aaKnown RBP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 CT62P0C5K7 136 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 SOX3P41225 446 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 CMPK2Q5EBM0 449 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 C11orf88Q6PI97 169 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 CHDHQ8NE62 594 aaPredicted RBP7.59□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF566Q969W8 418 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 ZBTB8AQ96BR9 441 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 PGAM5Q96HS1 289 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 INTS14Q96SY0 518 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 SNTG1Q9NSN8 517 aa7.59□□□□□ -1.19
PTPRD-204ENST00000397606 EIF3KQ9UBQ5 218 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms